Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CiitaP79621 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.35■□□□□ 0.53
CiitaP79621 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Mir770-201ENSMUST00000103252 94 ntBASIC18.35■□□□□ 0.53
CiitaP79621 Gm11336-201ENSMUST00000118168 334 ntBASIC18.35■□□□□ 0.53
CiitaP79621 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.35■□□□□ 0.53
CiitaP79621 Gm18115-201ENSMUST00000221209 621 ntBASIC18.35■□□□□ 0.53
CiitaP79621 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CiitaP79621 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CiitaP79621 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Gm11950-201ENSMUST00000121615 838 ntBASIC18.34■□□□□ 0.53
CiitaP79621 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.34■□□□□ 0.53
CiitaP79621 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CiitaP79621 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CiitaP79621 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CiitaP79621 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CiitaP79621 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.33■□□□□ 0.53
CiitaP79621 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CiitaP79621 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CiitaP79621 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CiitaP79621 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CiitaP79621 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CiitaP79621 Gm27704-201ENSMUST00000185094 107 ntBASIC18.33■□□□□ 0.52
CiitaP79621 Gm44450-201ENSMUST00000199528 114 ntBASIC18.33■□□□□ 0.52
CiitaP79621 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CiitaP79621 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CiitaP79621 Gm10819-201ENSMUST00000099988 561 ntBASIC18.33■□□□□ 0.52
CiitaP79621 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CiitaP79621 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CiitaP79621 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CiitaP79621 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CiitaP79621 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.33■□□□□ 0.52
CiitaP79621 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CiitaP79621 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CiitaP79621 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CiitaP79621 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CiitaP79621 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
CiitaP79621 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.32■□□□□ 0.52
CiitaP79621 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.32■□□□□ 0.52
CiitaP79621 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.32■□□□□ 0.52
CiitaP79621 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.32■□□□□ 0.52
CiitaP79621 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CiitaP79621 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CiitaP79621 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.31■□□□□ 0.52
CiitaP79621 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CiitaP79621 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CiitaP79621 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CiitaP79621 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CiitaP79621 Gm7284-201ENSMUST00000131667 944 ntBASIC18.31■□□□□ 0.52
CiitaP79621 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CiitaP79621 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CiitaP79621 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CiitaP79621 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CiitaP79621 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CiitaP79621 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CiitaP79621 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CiitaP79621 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CiitaP79621 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms