Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Six5P70178 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Six5P70178 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Six5P70178 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.82■□□□□ 0.12
Six5P70178 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.82■□□□□ 0.12
Six5P70178 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.82■□□□□ 0.12
Six5P70178 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.82■□□□□ 0.12
Six5P70178 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.82■□□□□ 0.12
Six5P70178 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.82■□□□□ 0.12
Six5P70178 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.82■□□□□ 0.12
Six5P70178 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Six5P70178 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six5P70178 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.82■□□□□ 0.12
Six5P70178 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Six5P70178 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Six5P70178 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.81■□□□□ 0.12
Six5P70178 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.81■□□□□ 0.12
Six5P70178 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.81■□□□□ 0.12
Six5P70178 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Six5P70178 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six5P70178 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.8■□□□□ 0.12
Six5P70178 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Six5P70178 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Six5P70178 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.8■□□□□ 0.12
Six5P70178 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.8■□□□□ 0.12
Six5P70178 Gm11539-201ENSMUST00000119837 557 ntBASIC15.8■□□□□ 0.12
Six5P70178 Gm13436-201ENSMUST00000120418 567 ntBASIC15.8■□□□□ 0.12
Six5P70178 Gm13559-201ENSMUST00000120476 863 ntBASIC15.8■□□□□ 0.12
Six5P70178 Gm13474-201ENSMUST00000122466 815 ntBASIC15.8■□□□□ 0.12
Six5P70178 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.8■□□□□ 0.12
Six5P70178 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.8■□□□□ 0.12
Six5P70178 Gm2274-201ENSMUST00000184539 609 ntBASIC15.8■□□□□ 0.12
Six5P70178 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.8■□□□□ 0.12
Six5P70178 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Six5P70178 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six5P70178 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Six5P70178 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Six5P70178 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Six5P70178 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Six5P70178 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Six5P70178 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Gm16061-201ENSMUST00000122167 857 ntBASIC15.79■□□□□ 0.12
Six5P70178 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.79■□□□□ 0.12
Six5P70178 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Six5P70178 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six5P70178 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms