Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Usp25P57080 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Usp25P57080 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp25P57080 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Usp25P57080 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Usp25P57080 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Usp25P57080 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.16■□□□□ 0.66
Usp25P57080 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Usp25P57080 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp25P57080 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp25P57080 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp25P57080 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Usp25P57080 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp25P57080 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp25P57080 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp25P57080 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.16■□□□□ 0.66
Usp25P57080 Gm26524-201ENSMUST00000192339 390 ntBASIC19.16■□□□□ 0.66
Usp25P57080 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Usp25P57080 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Usp25P57080 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.16■□□□□ 0.66
Usp25P57080 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Usp25P57080 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp25P57080 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp25P57080 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp25P57080 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp25P57080 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp25P57080 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp25P57080 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Usp25P57080 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Usp25P57080 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Usp25P57080 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.15■□□□□ 0.66
Usp25P57080 Gm13148-201ENSMUST00000118892 745 ntBASIC19.15■□□□□ 0.66
Usp25P57080 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Mir6349-201ENSMUST00000184059 97 ntBASIC19.15■□□□□ 0.66
Usp25P57080 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Usp25P57080 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp25P57080 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp25P57080 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Usp25P57080 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Gm6576-201ENSMUST00000169678 883 ntBASIC19.14■□□□□ 0.65
Usp25P57080 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.14■□□□□ 0.65
Usp25P57080 Gm5408-201ENSMUST00000197998 747 ntBASIC19.14■□□□□ 0.65
Usp25P57080 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Usp25P57080 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp25P57080 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Usp25P57080 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp25P57080 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp25P57080 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp25P57080 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp25P57080 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp25P57080 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp25P57080 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp25P57080 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp25P57080 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp25P57080 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp25P57080 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.13■□□□□ 0.65
Usp25P57080 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp25P57080 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp25P57080 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms