Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.7□□□□□ -0.22
Sssca1P56873 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.69□□□□□ -0.22
Sssca1P56873 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.69□□□□□ -0.22
Sssca1P56873 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sssca1P56873 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.69□□□□□ -0.22
Sssca1P56873 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Gm6576-201ENSMUST00000169678 883 ntBASIC13.69□□□□□ -0.22
Sssca1P56873 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.69□□□□□ -0.22
Sssca1P56873 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.69□□□□□ -0.22
Sssca1P56873 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.69□□□□□ -0.22
Sssca1P56873 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.69□□□□□ -0.22
Sssca1P56873 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.69□□□□□ -0.22
Sssca1P56873 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.69□□□□□ -0.22
Sssca1P56873 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.69□□□□□ -0.22
Sssca1P56873 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sssca1P56873 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.68□□□□□ -0.22
Sssca1P56873 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sssca1P56873 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sssca1P56873 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.68□□□□□ -0.22
Sssca1P56873 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Sssca1P56873 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.68□□□□□ -0.22
Sssca1P56873 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sssca1P56873 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.68□□□□□ -0.22
Sssca1P56873 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sssca1P56873 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Sssca1P56873 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Sssca1P56873 Gm4968-201ENSMUST00000071458 858 ntBASIC13.67□□□□□ -0.22
Sssca1P56873 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sssca1P56873 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sssca1P56873 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sssca1P56873 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sssca1P56873 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.67□□□□□ -0.22
Sssca1P56873 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sssca1P56873 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms