Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lim2P56563 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lim2P56563 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lim2P56563 Gm45058-201ENSMUST00000205810 766 ntBASIC16.92■□□□□ 0.3
Lim2P56563 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.92■□□□□ 0.3
Lim2P56563 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.92■□□□□ 0.3
Lim2P56563 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lim2P56563 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lim2P56563 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lim2P56563 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Lim2P56563 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lim2P56563 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.92■□□□□ 0.3
Lim2P56563 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lim2P56563 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Lim2P56563 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lim2P56563 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lim2P56563 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lim2P56563 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Lim2P56563 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lim2P56563 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.91■□□□□ 0.3
Lim2P56563 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.91■□□□□ 0.3
Lim2P56563 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.91■□□□□ 0.3
Lim2P56563 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lim2P56563 Gm16061-201ENSMUST00000122167 857 ntBASIC16.91■□□□□ 0.3
Lim2P56563 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lim2P56563 Mir5130-201ENSMUST00000175160 84 ntBASIC16.91■□□□□ 0.3
Lim2P56563 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lim2P56563 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lim2P56563 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lim2P56563 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lim2P56563 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lim2P56563 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Lim2P56563 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lim2P56563 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lim2P56563 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Lim2P56563 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.91■□□□□ 0.3
Lim2P56563 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lim2P56563 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.9■□□□□ 0.3
Lim2P56563 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.9■□□□□ 0.3
Lim2P56563 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.9■□□□□ 0.3
Lim2P56563 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Lim2P56563 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lim2P56563 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lim2P56563 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
Lim2P56563 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Lim2P56563 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.89■□□□□ 0.29
Lim2P56563 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lim2P56563 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lim2P56563 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.89■□□□□ 0.29
Lim2P56563 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.89■□□□□ 0.29
Lim2P56563 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.89■□□□□ 0.29
Lim2P56563 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.89■□□□□ 0.29
Lim2P56563 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.89■□□□□ 0.29
Lim2P56563 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Lim2P56563 Gm7370-201ENSMUST00000219471 767 ntBASIC16.89■□□□□ 0.29
Lim2P56563 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lim2P56563 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Lim2P56563 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Lim2P56563 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lim2P56563 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lim2P56563 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lim2P56563 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lim2P56563 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lim2P56563 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lim2P56563 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lim2P56563 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lim2P56563 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lim2P56563 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lim2P56563 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lim2P56563 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lim2P56563 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lim2P56563 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lim2P56563 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Lim2P56563 Gm13474-201ENSMUST00000122466 815 ntBASIC16.88■□□□□ 0.29
Lim2P56563 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.88■□□□□ 0.29
Lim2P56563 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Lim2P56563 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lim2P56563 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lim2P56563 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lim2P56563 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lim2P56563 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lim2P56563 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lim2P56563 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms