Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Irf5P56477 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.99■□□□□ 0.79
Irf5P56477 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Irf5P56477 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Irf5P56477 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Irf5P56477 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Irf5P56477 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Irf5P56477 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Irf5P56477 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Irf5P56477 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.98■□□□□ 0.79
Irf5P56477 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.98■□□□□ 0.79
Irf5P56477 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.98■□□□□ 0.79
Irf5P56477 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Irf5P56477 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Irf5P56477 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
Irf5P56477 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Irf5P56477 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Irf5P56477 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Irf5P56477 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Irf5P56477 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.97■□□□□ 0.79
Irf5P56477 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Irf5P56477 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Irf5P56477 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.97■□□□□ 0.79
Irf5P56477 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Irf5P56477 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Irf5P56477 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.97■□□□□ 0.79
Irf5P56477 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Irf5P56477 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Irf5P56477 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Irf5P56477 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Irf5P56477 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Irf5P56477 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Irf5P56477 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.96■□□□□ 0.79
Irf5P56477 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Irf5P56477 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.96■□□□□ 0.79
Irf5P56477 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Irf5P56477 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Irf5P56477 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Irf5P56477 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Irf5P56477 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Irf5P56477 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Irf5P56477 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Irf5P56477 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Irf5P56477 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.95■□□□□ 0.78
Irf5P56477 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Irf5P56477 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Irf5P56477 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Irf5P56477 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Irf5P56477 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Irf5P56477 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.95■□□□□ 0.78
Irf5P56477 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Irf5P56477 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.95■□□□□ 0.78
Irf5P56477 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Irf5P56477 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Irf5P56477 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Irf5P56477 Haglr-201ENSMUST00000100000 2085 ntBASIC19.95■□□□□ 0.78
Irf5P56477 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Irf5P56477 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.94■□□□□ 0.78
Irf5P56477 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Irf5P56477 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Irf5P56477 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Irf5P56477 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Irf5P56477 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Irf5P56477 Gm17808-201ENSMUST00000200859 894 ntBASIC19.94■□□□□ 0.78
Irf5P56477 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Irf5P56477 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.94■□□□□ 0.78
Irf5P56477 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Irf5P56477 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Irf5P56477 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms