Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NcanP55066 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NcanP55066 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NcanP55066 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NcanP55066 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NcanP55066 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NcanP55066 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NcanP55066 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NcanP55066 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NcanP55066 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.85■□□□□ 0.45
NcanP55066 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NcanP55066 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NcanP55066 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NcanP55066 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NcanP55066 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NcanP55066 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NcanP55066 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NcanP55066 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NcanP55066 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NcanP55066 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NcanP55066 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NcanP55066 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NcanP55066 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NcanP55066 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.84■□□□□ 0.45
NcanP55066 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.84■□□□□ 0.45
NcanP55066 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NcanP55066 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NcanP55066 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NcanP55066 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NcanP55066 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NcanP55066 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.84■□□□□ 0.45
NcanP55066 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NcanP55066 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NcanP55066 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NcanP55066 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
NcanP55066 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NcanP55066 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.83■□□□□ 0.44
NcanP55066 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.83■□□□□ 0.44
NcanP55066 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.83■□□□□ 0.44
NcanP55066 AV026068-213ENSMUST00000223675 1171 ntBASIC17.83■□□□□ 0.44
NcanP55066 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NcanP55066 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NcanP55066 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NcanP55066 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NcanP55066 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NcanP55066 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
NcanP55066 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NcanP55066 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.82■□□□□ 0.44
NcanP55066 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NcanP55066 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NcanP55066 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NcanP55066 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NcanP55066 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NcanP55066 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NcanP55066 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NcanP55066 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
NcanP55066 Gm13036-201ENSMUST00000117799 748 ntBASIC17.82■□□□□ 0.44
NcanP55066 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NcanP55066 Gm6550-201ENSMUST00000187574 993 ntBASIC17.82■□□□□ 0.44
NcanP55066 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.82■□□□□ 0.44
NcanP55066 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.82■□□□□ 0.44
NcanP55066 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NcanP55066 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.82■□□□□ 0.44
NcanP55066 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.82■□□□□ 0.44
NcanP55066 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NcanP55066 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NcanP55066 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NcanP55066 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
NcanP55066 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
NcanP55066 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.81■□□□□ 0.44
NcanP55066 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NcanP55066 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.81■□□□□ 0.44
NcanP55066 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.81■□□□□ 0.44
NcanP55066 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.81■□□□□ 0.44
NcanP55066 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.81■□□□□ 0.44
NcanP55066 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NcanP55066 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.8■□□□□ 0.44
NcanP55066 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NcanP55066 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms