Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.19■□□□□ 0.34
Ddx6P54823 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx6P54823 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx6P54823 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx6P54823 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx6P54823 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Ddx6P54823 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ddx6P54823 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx6P54823 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx6P54823 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx6P54823 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.18■□□□□ 0.34
Ddx6P54823 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ddx6P54823 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ddx6P54823 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ddx6P54823 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx6P54823 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ddx6P54823 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx6P54823 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx6P54823 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx6P54823 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.17■□□□□ 0.34
Ddx6P54823 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.17■□□□□ 0.34
Ddx6P54823 Gm24589-201ENSMUST00000116692 94 ntBASIC17.17■□□□□ 0.34
Ddx6P54823 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ddx6P54823 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.17■□□□□ 0.34
Ddx6P54823 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Ddx6P54823 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.17■□□□□ 0.34
Ddx6P54823 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx6P54823 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ddx6P54823 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Ddx6P54823 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.16■□□□□ 0.34
Ddx6P54823 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.16■□□□□ 0.34
Ddx6P54823 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.16■□□□□ 0.34
Ddx6P54823 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.16■□□□□ 0.34
Ddx6P54823 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.16■□□□□ 0.34
Ddx6P54823 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.16■□□□□ 0.34
Ddx6P54823 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ddx6P54823 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx6P54823 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ddx6P54823 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.15■□□□□ 0.34
Ddx6P54823 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx6P54823 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx6P54823 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ddx6P54823 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx6P54823 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx6P54823 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx6P54823 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx6P54823 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.15■□□□□ 0.34
Ddx6P54823 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx6P54823 Birc2-201ENSMUST00000054878 378 ntBASIC17.15■□□□□ 0.34
Ddx6P54823 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx6P54823 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.15■□□□□ 0.34
Ddx6P54823 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx6P54823 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.14■□□□□ 0.33
Ddx6P54823 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx6P54823 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx6P54823 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx6P54823 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx6P54823 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ddx6P54823 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx6P54823 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Ddx6P54823 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Ddx6P54823 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Ddx6P54823 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.14■□□□□ 0.33
Ddx6P54823 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx6P54823 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx6P54823 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx6P54823 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx6P54823 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx6P54823 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx6P54823 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Ddx6P54823 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx6P54823 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx6P54823 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx6P54823 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms