Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nub1P54729 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nub1P54729 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.19■□□□□ 0.5
Nub1P54729 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nub1P54729 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.19■□□□□ 0.5
Nub1P54729 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nub1P54729 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Nub1P54729 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nub1P54729 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nub1P54729 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nub1P54729 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nub1P54729 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nub1P54729 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nub1P54729 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nub1P54729 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nub1P54729 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nub1P54729 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nub1P54729 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.18■□□□□ 0.5
Nub1P54729 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.18■□□□□ 0.5
Nub1P54729 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.18■□□□□ 0.5
Nub1P54729 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nub1P54729 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nub1P54729 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nub1P54729 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nub1P54729 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.17■□□□□ 0.5
Nub1P54729 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.17■□□□□ 0.5
Nub1P54729 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Nub1P54729 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nub1P54729 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nub1P54729 Gm7889-201ENSMUST00000185591 958 ntBASIC18.16■□□□□ 0.5
Nub1P54729 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.16■□□□□ 0.5
Nub1P54729 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nub1P54729 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.15■□□□□ 0.5
Nub1P54729 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nub1P54729 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nub1P54729 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nub1P54729 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.15■□□□□ 0.5
Nub1P54729 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Nub1P54729 Gm27000-201ENSMUST00000182943 842 ntBASIC18.15■□□□□ 0.5
Nub1P54729 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.15■□□□□ 0.5
Nub1P54729 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nub1P54729 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nub1P54729 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nub1P54729 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nub1P54729 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nub1P54729 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.15■□□□□ 0.5
Nub1P54729 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nub1P54729 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.15■□□□□ 0.5
Nub1P54729 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nub1P54729 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms