Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Msh6P54276 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Msh6P54276 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msh6P54276 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msh6P54276 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msh6P54276 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msh6P54276 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Msh6P54276 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Msh6P54276 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Msh6P54276 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Msh6P54276 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Msh6P54276 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Msh6P54276 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC21.42■■□□□ 1.02
Msh6P54276 Gm18733-201ENSMUST00000173950 856 ntBASIC21.42■■□□□ 1.02
Msh6P54276 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.42■■□□□ 1.02
Msh6P54276 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.42■■□□□ 1.02
Msh6P54276 AC159301.1-201ENSMUST00000225130 1182 ntBASIC21.42■■□□□ 1.02
Msh6P54276 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Msh6P54276 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Msh6P54276 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.42■■□□□ 1.02
Msh6P54276 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Msh6P54276 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.42■■□□□ 1.02
Msh6P54276 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Msh6P54276 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh6P54276 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh6P54276 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh6P54276 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Msh6P54276 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh6P54276 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC21.41■■□□□ 1.02
Msh6P54276 Gm44450-201ENSMUST00000199528 114 ntBASIC21.41■■□□□ 1.02
Msh6P54276 Gm5712-201ENSMUST00000199748 1043 ntBASIC21.41■■□□□ 1.02
Msh6P54276 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh6P54276 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Msh6P54276 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh6P54276 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh6P54276 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh6P54276 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Msh6P54276 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh6P54276 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh6P54276 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Msh6P54276 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Msh6P54276 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.4■■□□□ 1.02
Msh6P54276 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh6P54276 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh6P54276 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh6P54276 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Msh6P54276 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh6P54276 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh6P54276 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh6P54276 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh6P54276 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh6P54276 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Msh6P54276 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.39■■□□□ 1.02
Msh6P54276 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.39■■□□□ 1.02
Msh6P54276 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Msh6P54276 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Msh6P54276 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC21.39■■□□□ 1.02
Msh6P54276 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Msh6P54276 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Msh6P54276 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.39■■□□□ 1.02
Msh6P54276 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC21.39■■□□□ 1.02
Msh6P54276 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.39■■□□□ 1.02
Msh6P54276 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Msh6P54276 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Msh6P54276 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.39■■□□□ 1.01
Msh6P54276 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Msh6P54276 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Msh6P54276 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Msh6P54276 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msh6P54276 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msh6P54276 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msh6P54276 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msh6P54276 Gm27525-201ENSMUST00000184465 107 ntBASIC21.38■■□□□ 1.01
Msh6P54276 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Msh6P54276 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msh6P54276 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msh6P54276 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.38■■□□□ 1.01
Msh6P54276 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC21.38■■□□□ 1.01
Msh6P54276 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msh6P54276 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msh6P54276 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC21.38■■□□□ 1.01
Msh6P54276 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Msh6P54276 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.38■■□□□ 1.01
Msh6P54276 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Msh6P54276 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.37■■□□□ 1.01
Msh6P54276 Gm11452-201ENSMUST00000122376 690 ntBASIC21.37■■□□□ 1.01
Msh6P54276 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msh6P54276 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msh6P54276 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msh6P54276 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msh6P54276 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msh6P54276 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msh6P54276 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Msh6P54276 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.37■■□□□ 1.01
Msh6P54276 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msh6P54276 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Msh6P54276 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.37■■□□□ 1.01
Msh6P54276 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msh6P54276 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.37■■□□□ 1.01
Msh6P54276 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms