Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.17■□□□□ 0.18
Sox3P53784 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox3P53784 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.16■□□□□ 0.18
Sox3P53784 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Sox3P53784 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.16■□□□□ 0.18
Sox3P53784 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Sox3P53784 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox3P53784 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Sox3P53784 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox3P53784 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
Sox3P53784 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox3P53784 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.15■□□□□ 0.18
Sox3P53784 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Gm21559-201ENSMUST00000220638 855 ntBASIC16.15■□□□□ 0.18
Sox3P53784 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Gm8587-201ENSMUST00000076538 843 ntBASIC16.15■□□□□ 0.18
Sox3P53784 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.15■□□□□ 0.18
Sox3P53784 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.15■□□□□ 0.18
Sox3P53784 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox3P53784 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sox3P53784 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Sox3P53784 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Sox3P53784 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sox3P53784 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sox3P53784 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.14■□□□□ 0.17
Sox3P53784 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.14■□□□□ 0.17
Sox3P53784 Gm18115-201ENSMUST00000221209 621 ntBASIC16.14■□□□□ 0.17
Sox3P53784 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.14■□□□□ 0.17
Sox3P53784 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sox3P53784 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox3P53784 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Sox3P53784 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sox3P53784 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sox3P53784 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.13■□□□□ 0.17
Sox3P53784 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.13■□□□□ 0.17
Sox3P53784 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox3P53784 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sox3P53784 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Sox3P53784 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox3P53784 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms