Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdx1P52946 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.72■□□□□ 0.27
Pdx1P52946 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.72■□□□□ 0.27
Pdx1P52946 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.72■□□□□ 0.27
Pdx1P52946 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pdx1P52946 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.72■□□□□ 0.27
Pdx1P52946 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pdx1P52946 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.72■□□□□ 0.27
Pdx1P52946 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pdx1P52946 Gm6433-201ENSMUST00000118634 875 ntBASIC16.71■□□□□ 0.27
Pdx1P52946 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pdx1P52946 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.71■□□□□ 0.27
Pdx1P52946 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.71■□□□□ 0.27
Pdx1P52946 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Pdx1P52946 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.71■□□□□ 0.27
Pdx1P52946 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pdx1P52946 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Pdx1P52946 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdx1P52946 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pdx1P52946 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pdx1P52946 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
Pdx1P52946 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.7■□□□□ 0.26
Pdx1P52946 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pdx1P52946 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pdx1P52946 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdx1P52946 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pdx1P52946 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.69■□□□□ 0.26
Pdx1P52946 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.69■□□□□ 0.26
Pdx1P52946 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Gm16061-201ENSMUST00000122167 857 ntBASIC16.69■□□□□ 0.26
Pdx1P52946 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pdx1P52946 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.69■□□□□ 0.26
Pdx1P52946 Gm9987-201ENSMUST00000069768 567 ntBASIC16.69■□□□□ 0.26
Pdx1P52946 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.69■□□□□ 0.26
Pdx1P52946 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pdx1P52946 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pdx1P52946 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Pdx1P52946 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pdx1P52946 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pdx1P52946 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdx1P52946 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.68■□□□□ 0.26
Pdx1P52946 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms