Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TubP50586 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TubP50586 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TubP50586 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
TubP50586 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TubP50586 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TubP50586 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TubP50586 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TubP50586 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TubP50586 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TubP50586 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TubP50586 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TubP50586 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TubP50586 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TubP50586 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.33■□□□□ 0.37
TubP50586 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TubP50586 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TubP50586 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TubP50586 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.33■□□□□ 0.37
TubP50586 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TubP50586 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TubP50586 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TubP50586 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TubP50586 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TubP50586 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TubP50586 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TubP50586 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.33■□□□□ 0.36
TubP50586 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TubP50586 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TubP50586 Gm7213-201ENSMUST00000215977 950 ntBASIC17.33■□□□□ 0.36
TubP50586 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TubP50586 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TubP50586 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TubP50586 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TubP50586 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TubP50586 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TubP50586 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TubP50586 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TubP50586 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TubP50586 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TubP50586 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TubP50586 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TubP50586 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.32■□□□□ 0.36
TubP50586 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TubP50586 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TubP50586 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TubP50586 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TubP50586 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TubP50586 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TubP50586 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TubP50586 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TubP50586 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TubP50586 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
TubP50586 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TubP50586 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.31■□□□□ 0.36
TubP50586 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TubP50586 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TubP50586 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TubP50586 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.31■□□□□ 0.36
TubP50586 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.31■□□□□ 0.36
TubP50586 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.31■□□□□ 0.36
TubP50586 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TubP50586 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TubP50586 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TubP50586 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TubP50586 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TubP50586 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TubP50586 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.3■□□□□ 0.36
TubP50586 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.3■□□□□ 0.36
TubP50586 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TubP50586 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.3■□□□□ 0.36
TubP50586 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TubP50586 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TubP50586 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TubP50586 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TubP50586 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TubP50586 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TubP50586 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.29■□□□□ 0.36
TubP50586 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TubP50586 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.29■□□□□ 0.36
TubP50586 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TubP50586 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TubP50586 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TubP50586 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TubP50586 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.29■□□□□ 0.36
TubP50586 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TubP50586 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms