Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Lhx3P50481 AA414768-201ENSMUST00000121924 1257 ntBASIC17.15■□□□□ 0.34
Lhx3P50481 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx3P50481 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lhx3P50481 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.15■□□□□ 0.34
Lhx3P50481 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lhx3P50481 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.15■□□□□ 0.34
Lhx3P50481 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx3P50481 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx3P50481 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx3P50481 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lhx3P50481 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx3P50481 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx3P50481 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Lhx3P50481 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lhx3P50481 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx3P50481 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx3P50481 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Lhx3P50481 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
Lhx3P50481 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lhx3P50481 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lhx3P50481 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.14■□□□□ 0.33
Lhx3P50481 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Lhx3P50481 Gm18115-201ENSMUST00000221209 621 ntBASIC17.14■□□□□ 0.33
Lhx3P50481 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lhx3P50481 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.14■□□□□ 0.33
Lhx3P50481 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx3P50481 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lhx3P50481 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.14■□□□□ 0.33
Lhx3P50481 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.13■□□□□ 0.33
Lhx3P50481 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.13■□□□□ 0.33
Lhx3P50481 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Lhx3P50481 Gm11336-201ENSMUST00000118168 334 ntBASIC17.13■□□□□ 0.33
Lhx3P50481 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Lhx3P50481 Gm5587-201ENSMUST00000206270 674 ntBASIC17.13■□□□□ 0.33
Lhx3P50481 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lhx3P50481 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Lhx3P50481 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx3P50481 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lhx3P50481 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lhx3P50481 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Gm9013-201ENSMUST00000132939 882 ntBASIC17.12■□□□□ 0.33
Lhx3P50481 Gm6345-202ENSMUST00000180900 204 ntBASIC17.12■□□□□ 0.33
Lhx3P50481 Gm44450-201ENSMUST00000199528 114 ntBASIC17.12■□□□□ 0.33
Lhx3P50481 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lhx3P50481 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx3P50481 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx3P50481 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx3P50481 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx3P50481 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lhx3P50481 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.11■□□□□ 0.33
Lhx3P50481 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx3P50481 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx3P50481 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx3P50481 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.11■□□□□ 0.33
Lhx3P50481 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lhx3P50481 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx3P50481 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx3P50481 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx3P50481 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lhx3P50481 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.1■□□□□ 0.33
Lhx3P50481 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms