Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SftpbP50405 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SftpbP50405 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SftpbP50405 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SftpbP50405 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SftpbP50405 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SftpbP50405 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SftpbP50405 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SftpbP50405 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SftpbP50405 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SftpbP50405 Gm12382-201ENSMUST00000122005 922 ntBASIC17.33■□□□□ 0.36
SftpbP50405 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SftpbP50405 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SftpbP50405 Gm37292-201ENSMUST00000192062 758 ntBASIC17.33■□□□□ 0.36
SftpbP50405 Gm4974-201ENSMUST00000209974 875 ntBASIC17.33■□□□□ 0.36
SftpbP50405 Gm20049-201ENSMUST00000219950 730 ntBASIC17.33■□□□□ 0.36
SftpbP50405 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SftpbP50405 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SftpbP50405 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SftpbP50405 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SftpbP50405 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.32■□□□□ 0.36
SftpbP50405 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.32■□□□□ 0.36
SftpbP50405 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.32■□□□□ 0.36
SftpbP50405 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.32■□□□□ 0.36
SftpbP50405 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SftpbP50405 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SftpbP50405 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SftpbP50405 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SftpbP50405 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SftpbP50405 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.31■□□□□ 0.36
SftpbP50405 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SftpbP50405 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SftpbP50405 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SftpbP50405 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.31■□□□□ 0.36
SftpbP50405 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SftpbP50405 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
SftpbP50405 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.3■□□□□ 0.36
SftpbP50405 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Gm13216-201ENSMUST00000117145 591 ntBASIC17.3■□□□□ 0.36
SftpbP50405 Gm10517-202ENSMUST00000192970 758 ntBASIC17.3■□□□□ 0.36
SftpbP50405 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SftpbP50405 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SftpbP50405 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms