Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Brca1P48754 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Brca1P48754 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Brca1P48754 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.99■□□□□ 0.63
Brca1P48754 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Brca1P48754 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Brca1P48754 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.99■□□□□ 0.63
Brca1P48754 Gm25911-201ENSMUST00000157621 56 ntBASIC18.99■□□□□ 0.63
Brca1P48754 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.99■□□□□ 0.63
Brca1P48754 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Brca1P48754 Gm10175-201ENSMUST00000086013 645 ntBASIC18.99■□□□□ 0.63
Brca1P48754 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Brca1P48754 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Brca1P48754 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Brca1P48754 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.98■□□□□ 0.63
Brca1P48754 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Brca1P48754 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Brca1P48754 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Brca1P48754 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.98■□□□□ 0.63
Brca1P48754 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Brca1P48754 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Brca1P48754 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Brca1P48754 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.98■□□□□ 0.63
Brca1P48754 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Brca1P48754 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Brca1P48754 Gm13312-201ENSMUST00000119631 718 ntBASIC18.97■□□□□ 0.63
Brca1P48754 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.97■□□□□ 0.63
Brca1P48754 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.97■□□□□ 0.63
Brca1P48754 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Brca1P48754 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Brca1P48754 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Brca1P48754 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Brca1P48754 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Brca1P48754 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Brca1P48754 Gm13036-201ENSMUST00000117799 748 ntBASIC18.97■□□□□ 0.63
Brca1P48754 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.97■□□□□ 0.63
Brca1P48754 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.97■□□□□ 0.63
Brca1P48754 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.97■□□□□ 0.63
Brca1P48754 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.97■□□□□ 0.63
Brca1P48754 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Brca1P48754 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.97■□□□□ 0.63
Brca1P48754 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Brca1P48754 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.96■□□□□ 0.63
Brca1P48754 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Brca1P48754 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Brca1P48754 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.96■□□□□ 0.63
Brca1P48754 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Brca1P48754 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Brca1P48754 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Brca1P48754 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Brca1P48754 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.95■□□□□ 0.62
Brca1P48754 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Brca1P48754 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Brca1P48754 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Brca1P48754 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.95■□□□□ 0.62
Brca1P48754 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.95■□□□□ 0.62
Brca1P48754 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.95■□□□□ 0.62
Brca1P48754 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.95■□□□□ 0.62
Brca1P48754 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Brca1P48754 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.95■□□□□ 0.62
Brca1P48754 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Brca1P48754 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Brca1P48754 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Brca1P48754 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Brca1P48754 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Brca1P48754 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Brca1P48754 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Brca1P48754 Gm27397-201ENSMUST00000184997 107 ntBASIC18.94■□□□□ 0.62
Brca1P48754 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.94■□□□□ 0.62
Brca1P48754 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.94■□□□□ 0.62
Brca1P48754 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Brca1P48754 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Brca1P48754 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Brca1P48754 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Brca1P48754 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Brca1P48754 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca1P48754 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Brca1P48754 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.93■□□□□ 0.62
Brca1P48754 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Brca1P48754 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Brca1P48754 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Brca1P48754 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca1P48754 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca1P48754 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca1P48754 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Brca1P48754 Gm15173-201ENSMUST00000122049 433 ntBASIC18.93■□□□□ 0.62
Brca1P48754 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Brca1P48754 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms