Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nedd4P46935 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nedd4P46935 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nedd4P46935 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.35■□□□□ 0.85
Nedd4P46935 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nedd4P46935 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Nedd4P46935 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.35■□□□□ 0.85
Nedd4P46935 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nedd4P46935 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nedd4P46935 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nedd4P46935 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nedd4P46935 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nedd4P46935 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.34■□□□□ 0.85
Nedd4P46935 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Nedd4P46935 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nedd4P46935 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.34■□□□□ 0.85
Nedd4P46935 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nedd4P46935 Gm15590-201ENSMUST00000078419 552 ntBASIC20.34■□□□□ 0.85
Nedd4P46935 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nedd4P46935 Idnk-204ENSMUST00000226010 1898 ntBASIC20.34■□□□□ 0.85
Nedd4P46935 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nedd4P46935 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.34■□□□□ 0.85
Nedd4P46935 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nedd4P46935 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nedd4P46935 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.34■□□□□ 0.85
Nedd4P46935 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nedd4P46935 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nedd4P46935 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nedd4P46935 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nedd4P46935 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nedd4P46935 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nedd4P46935 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nedd4P46935 Gm25990-201ENSMUST00000102440 86 ntBASIC20.33■□□□□ 0.85
Nedd4P46935 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nedd4P46935 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.33■□□□□ 0.85
Nedd4P46935 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nedd4P46935 Gm7230-201ENSMUST00000173026 815 ntBASIC20.33■□□□□ 0.85
Nedd4P46935 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.33■□□□□ 0.85
Nedd4P46935 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.33■□□□□ 0.85
Nedd4P46935 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Nedd4P46935 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Nedd4P46935 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nedd4P46935 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nedd4P46935 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nedd4P46935 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nedd4P46935 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nedd4P46935 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nedd4P46935 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nedd4P46935 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nedd4P46935 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nedd4P46935 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nedd4P46935 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Nedd4P46935 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nedd4P46935 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nedd4P46935 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Nedd4P46935 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nedd4P46935 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nedd4P46935 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nedd4P46935 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nedd4P46935 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nedd4P46935 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.31■□□□□ 0.84
Nedd4P46935 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.31■□□□□ 0.84
Nedd4P46935 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Nedd4P46935 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nedd4P46935 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.31■□□□□ 0.84
Nedd4P46935 Gm18421-201ENSMUST00000204122 625 ntBASIC20.31■□□□□ 0.84
Nedd4P46935 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.31■□□□□ 0.84
Nedd4P46935 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nedd4P46935 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nedd4P46935 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nedd4P46935 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nedd4P46935 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nedd4P46935 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nedd4P46935 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nedd4P46935 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nedd4P46935 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nedd4P46935 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nedd4P46935 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Nedd4P46935 Gm13418-201ENSMUST00000119097 944 ntBASIC20.3■□□□□ 0.84
Nedd4P46935 Gm14140-201ENSMUST00000119999 995 ntBASIC20.3■□□□□ 0.84
Nedd4P46935 Gm15173-201ENSMUST00000122049 433 ntBASIC20.3■□□□□ 0.84
Nedd4P46935 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nedd4P46935 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.3■□□□□ 0.84
Nedd4P46935 Gm9727-201ENSMUST00000161387 555 ntBASIC20.3■□□□□ 0.84
Nedd4P46935 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.3■□□□□ 0.84
Nedd4P46935 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.3■□□□□ 0.84
Nedd4P46935 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.3■□□□□ 0.84
Nedd4P46935 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nedd4P46935 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nedd4P46935 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nedd4P46935 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nedd4P46935 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nedd4P46935 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nedd4P46935 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Nedd4P46935 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nedd4P46935 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Nedd4P46935 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nedd4P46935 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.29■□□□□ 0.84
Nedd4P46935 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.29■□□□□ 0.84
Nedd4P46935 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms