Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Sdc2P43407 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sdc2P43407 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc2P43407 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Sdc2P43407 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc2P43407 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.96■□□□□ 0.63
Sdc2P43407 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.96■□□□□ 0.63
Sdc2P43407 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.96■□□□□ 0.63
Sdc2P43407 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc2P43407 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc2P43407 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.96■□□□□ 0.63
Sdc2P43407 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sdc2P43407 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc2P43407 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc2P43407 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc2P43407 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdc2P43407 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sdc2P43407 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Gm17661-201ENSMUST00000170317 270 ntBASIC18.95■□□□□ 0.62
Sdc2P43407 Gm37025-201ENSMUST00000195159 829 ntBASIC18.95■□□□□ 0.62
Sdc2P43407 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sdc2P43407 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdc2P43407 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.94■□□□□ 0.62
Sdc2P43407 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.94■□□□□ 0.62
Sdc2P43407 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Gm29257-201ENSMUST00000186115 639 ntBASIC18.94■□□□□ 0.62
Sdc2P43407 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdc2P43407 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sdc2P43407 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Sdc2P43407 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sdc2P43407 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sdc2P43407 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.93■□□□□ 0.62
Sdc2P43407 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sdc2P43407 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.93■□□□□ 0.62
Sdc2P43407 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sdc2P43407 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.93■□□□□ 0.62
Sdc2P43407 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.93■□□□□ 0.62
Sdc2P43407 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sdc2P43407 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.93■□□□□ 0.62
Sdc2P43407 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.93■□□□□ 0.62
Sdc2P43407 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc2P43407 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc2P43407 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Sdc2P43407 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc2P43407 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc2P43407 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc2P43407 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc2P43407 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc2P43407 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc2P43407 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sdc2P43407 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sdc2P43407 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc2P43407 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc2P43407 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms