Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Gdf6P43028 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.78■□□□□ 0.44
Gdf6P43028 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gdf6P43028 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gdf6P43028 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.78■□□□□ 0.44
Gdf6P43028 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gdf6P43028 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gdf6P43028 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.78■□□□□ 0.44
Gdf6P43028 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gdf6P43028 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gdf6P43028 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gdf6P43028 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gdf6P43028 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Gdf6P43028 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gdf6P43028 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Gdf6P43028 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gdf6P43028 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gdf6P43028 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Gdf6P43028 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.77■□□□□ 0.44
Gdf6P43028 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Gdf6P43028 Olfr129-201ENSMUST00000122318 993 ntBASIC17.77■□□□□ 0.44
Gdf6P43028 Gm44450-201ENSMUST00000199528 114 ntBASIC17.77■□□□□ 0.44
Gdf6P43028 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Gdf6P43028 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gdf6P43028 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.77■□□□□ 0.43
Gdf6P43028 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.77■□□□□ 0.43
Gdf6P43028 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gdf6P43028 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Gdf6P43028 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gdf6P43028 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gdf6P43028 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gdf6P43028 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gdf6P43028 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gdf6P43028 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gdf6P43028 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Gdf6P43028 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.76■□□□□ 0.43
Gdf6P43028 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.76■□□□□ 0.43
Gdf6P43028 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.76■□□□□ 0.43
Gdf6P43028 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gdf6P43028 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gdf6P43028 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.76■□□□□ 0.43
Gdf6P43028 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gdf6P43028 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gdf6P43028 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gdf6P43028 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.76■□□□□ 0.43
Gdf6P43028 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.76■□□□□ 0.43
Gdf6P43028 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Gdf6P43028 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gdf6P43028 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gdf6P43028 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gdf6P43028 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gdf6P43028 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.75■□□□□ 0.43
Gdf6P43028 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gdf6P43028 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gdf6P43028 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gdf6P43028 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Gdf6P43028 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.75■□□□□ 0.43
Gdf6P43028 Gm15794-201ENSMUST00000120182 631 ntBASIC17.75■□□□□ 0.43
Gdf6P43028 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gdf6P43028 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.75■□□□□ 0.43
Gdf6P43028 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.75■□□□□ 0.43
Gdf6P43028 Mir3081-201ENSMUST00000175305 84 ntBASIC17.75■□□□□ 0.43
Gdf6P43028 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.75■□□□□ 0.43
Gdf6P43028 Gm18669-201ENSMUST00000216049 778 ntBASIC17.75■□□□□ 0.43
Gdf6P43028 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.75■□□□□ 0.43
Gdf6P43028 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gdf6P43028 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Gdf6P43028 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gdf6P43028 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gdf6P43028 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.75■□□□□ 0.43
Gdf6P43028 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gdf6P43028 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gdf6P43028 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gdf6P43028 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gdf6P43028 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Gdf6P43028 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gdf6P43028 Gm27741-201ENSMUST00000185060 237 ntBASIC17.74■□□□□ 0.43
Gdf6P43028 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gdf6P43028 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.74■□□□□ 0.43
Gdf6P43028 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gdf6P43028 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gdf6P43028 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gdf6P43028 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gdf6P43028 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gdf6P43028 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gdf6P43028 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gdf6P43028 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms