Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HttP42859 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.1■□□□□ 0.49
HttP42859 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HttP42859 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HttP42859 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HttP42859 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HttP42859 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.09■□□□□ 0.49
HttP42859 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.09■□□□□ 0.49
HttP42859 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HttP42859 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HttP42859 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HttP42859 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HttP42859 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HttP42859 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HttP42859 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HttP42859 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.09■□□□□ 0.49
HttP42859 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.09■□□□□ 0.49
HttP42859 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HttP42859 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HttP42859 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HttP42859 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HttP42859 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.09■□□□□ 0.49
HttP42859 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HttP42859 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.09■□□□□ 0.49
HttP42859 Mir8112-201ENSMUST00000184382 131 ntBASIC18.09■□□□□ 0.49
HttP42859 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HttP42859 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HttP42859 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HttP42859 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HttP42859 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HttP42859 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HttP42859 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.08■□□□□ 0.49
HttP42859 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HttP42859 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HttP42859 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.08■□□□□ 0.48
HttP42859 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HttP42859 Gm5745-201ENSMUST00000183748 313 ntBASIC18.08■□□□□ 0.48
HttP42859 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HttP42859 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HttP42859 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HttP42859 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.08■□□□□ 0.48
HttP42859 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HttP42859 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HttP42859 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
HttP42859 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HttP42859 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HttP42859 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.06■□□□□ 0.48
HttP42859 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.06■□□□□ 0.48
HttP42859 Gm7506-201ENSMUST00000207758 815 ntBASIC18.06■□□□□ 0.48
HttP42859 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HttP42859 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HttP42859 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HttP42859 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HttP42859 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
HttP42859 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
HttP42859 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.05■□□□□ 0.48
HttP42859 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.05■□□□□ 0.48
HttP42859 Gm44430-201ENSMUST00000203376 995 ntBASIC18.05■□□□□ 0.48
HttP42859 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HttP42859 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HttP42859 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HttP42859 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HttP42859 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HttP42859 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HttP42859 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HttP42859 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.05■□□□□ 0.48
HttP42859 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HttP42859 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HttP42859 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
HttP42859 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HttP42859 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HttP42859 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HttP42859 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms