Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.58□□□□□ -0.08
Slc6a1P31648 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a1P31648 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a1P31648 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a1P31648 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Slc6a1P31648 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a1P31648 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a1P31648 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a1P31648 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a1P31648 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Slc6a1P31648 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Slc6a1P31648 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.57□□□□□ -0.08
Slc6a1P31648 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Slc6a1P31648 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Slc6a1P31648 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.57□□□□□ -0.08
Slc6a1P31648 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a1P31648 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Slc6a1P31648 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Slc6a1P31648 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Slc6a1P31648 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc6a1P31648 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc6a1P31648 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Slc6a1P31648 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc6a1P31648 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc6a1P31648 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc6a1P31648 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Slc6a1P31648 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Slc6a1P31648 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Slc6a1P31648 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a1P31648 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Slc6a1P31648 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.55□□□□□ -0.08
Slc6a1P31648 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Slc6a1P31648 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Slc6a1P31648 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.55□□□□□ -0.08
Slc6a1P31648 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.55□□□□□ -0.08
Slc6a1P31648 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Slc6a1P31648 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Slc6a1P31648 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Slc6a1P31648 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Slc6a1P31648 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.55□□□□□ -0.08
Slc6a1P31648 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a1P31648 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms