Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcam1P29533 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vcam1P29533 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcam1P29533 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Vcam1P29533 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.44■□□□□ 0.7
Vcam1P29533 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.44■□□□□ 0.7
Vcam1P29533 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.44■□□□□ 0.7
Vcam1P29533 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Vcam1P29533 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vcam1P29533 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vcam1P29533 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Vcam1P29533 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vcam1P29533 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcam1P29533 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vcam1P29533 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcam1P29533 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vcam1P29533 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.44■□□□□ 0.7
Vcam1P29533 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcam1P29533 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.43■□□□□ 0.7
Vcam1P29533 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcam1P29533 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vcam1P29533 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcam1P29533 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.43■□□□□ 0.7
Vcam1P29533 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcam1P29533 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vcam1P29533 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.43■□□□□ 0.7
Vcam1P29533 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcam1P29533 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vcam1P29533 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vcam1P29533 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Vcam1P29533 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vcam1P29533 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.42■□□□□ 0.7
Vcam1P29533 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Vcam1P29533 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Vcam1P29533 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vcam1P29533 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vcam1P29533 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vcam1P29533 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Vcam1P29533 Gm15372-201ENSMUST00000120729 834 ntBASIC19.41■□□□□ 0.7
Vcam1P29533 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.41■□□□□ 0.7
Vcam1P29533 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vcam1P29533 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.41■□□□□ 0.7
Vcam1P29533 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.41■□□□□ 0.7
Vcam1P29533 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vcam1P29533 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vcam1P29533 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vcam1P29533 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Vcam1P29533 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Vcam1P29533 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vcam1P29533 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcam1P29533 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Vcam1P29533 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcam1P29533 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.4■□□□□ 0.7
Vcam1P29533 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.4■□□□□ 0.7
Vcam1P29533 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.4■□□□□ 0.7
Vcam1P29533 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vcam1P29533 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcam1P29533 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vcam1P29533 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcam1P29533 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcam1P29533 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vcam1P29533 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
Vcam1P29533 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.39■□□□□ 0.69
Vcam1P29533 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vcam1P29533 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Vcam1P29533 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.39■□□□□ 0.69
Vcam1P29533 Gm13312-201ENSMUST00000119631 718 ntBASIC19.39■□□□□ 0.69
Vcam1P29533 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.39■□□□□ 0.69
Vcam1P29533 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vcam1P29533 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.39■□□□□ 0.69
Vcam1P29533 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vcam1P29533 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vcam1P29533 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vcam1P29533 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vcam1P29533 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vcam1P29533 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vcam1P29533 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vcam1P29533 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcam1P29533 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcam1P29533 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcam1P29533 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcam1P29533 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.38■□□□□ 0.69
Vcam1P29533 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vcam1P29533 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcam1P29533 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vcam1P29533 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcam1P29533 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcam1P29533 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms