Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.3■□□□□ 0.04
Cd40P27512 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cd40P27512 Mir5130-201ENSMUST00000175160 84 ntBASIC15.3■□□□□ 0.04
Cd40P27512 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.3■□□□□ 0.04
Cd40P27512 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cd40P27512 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cd40P27512 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cd40P27512 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Cd40P27512 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.29■□□□□ 0.04
Cd40P27512 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cd40P27512 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd40P27512 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cd40P27512 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.28■□□□□ 0.04
Cd40P27512 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.28■□□□□ 0.04
Cd40P27512 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.28■□□□□ 0.04
Cd40P27512 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.28■□□□□ 0.04
Cd40P27512 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.28■□□□□ 0.04
Cd40P27512 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd40P27512 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd40P27512 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd40P27512 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd40P27512 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd40P27512 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd40P27512 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd40P27512 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd40P27512 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cd40P27512 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd40P27512 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd40P27512 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Cd40P27512 Gm7213-201ENSMUST00000215977 950 ntBASIC15.27■□□□□ 0.04
Cd40P27512 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd40P27512 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd40P27512 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd40P27512 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.27■□□□□ 0.03
Cd40P27512 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd40P27512 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd40P27512 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd40P27512 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cd40P27512 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd40P27512 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.27■□□□□ 0.03
Cd40P27512 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.26■□□□□ 0.03
Cd40P27512 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40P27512 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40P27512 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40P27512 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40P27512 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40P27512 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cd40P27512 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40P27512 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40P27512 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40P27512 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cd40P27512 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.26■□□□□ 0.03
Cd40P27512 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40P27512 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms