Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nfkb1P25799 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nfkb1P25799 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nfkb1P25799 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nfkb1P25799 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.36■□□□□ 0.37
Nfkb1P25799 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.36■□□□□ 0.37
Nfkb1P25799 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.36■□□□□ 0.37
Nfkb1P25799 Mir770-201ENSMUST00000103252 94 ntBASIC17.36■□□□□ 0.37
Nfkb1P25799 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.36■□□□□ 0.37
Nfkb1P25799 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Nfkb1P25799 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nfkb1P25799 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.35■□□□□ 0.37
Nfkb1P25799 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 Gm6623-201ENSMUST00000173570 544 ntBASIC17.35■□□□□ 0.37
Nfkb1P25799 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nfkb1P25799 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.35■□□□□ 0.37
Nfkb1P25799 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nfkb1P25799 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nfkb1P25799 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.34■□□□□ 0.37
Nfkb1P25799 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.34■□□□□ 0.37
Nfkb1P25799 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.34■□□□□ 0.37
Nfkb1P25799 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Nfkb1P25799 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nfkb1P25799 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
Nfkb1P25799 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nfkb1P25799 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.34■□□□□ 0.37
Nfkb1P25799 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nfkb1P25799 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Nfkb1P25799 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nfkb1P25799 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nfkb1P25799 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nfkb1P25799 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nfkb1P25799 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nfkb1P25799 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.33■□□□□ 0.36
Nfkb1P25799 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.33■□□□□ 0.36
Nfkb1P25799 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nfkb1P25799 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.33■□□□□ 0.36
Nfkb1P25799 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nfkb1P25799 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nfkb1P25799 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.33■□□□□ 0.36
Nfkb1P25799 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Nfkb1P25799 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nfkb1P25799 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nfkb1P25799 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nfkb1P25799 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nfkb1P25799 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nfkb1P25799 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.32■□□□□ 0.36
Nfkb1P25799 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.32■□□□□ 0.36
Nfkb1P25799 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms