Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxd8P23463 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxd8P23463 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.43■□□□□ 0.38
Hoxd8P23463 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxd8P23463 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxd8P23463 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.43■□□□□ 0.38
Hoxd8P23463 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxd8P23463 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hoxd8P23463 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hoxd8P23463 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxd8P23463 Mir8098-201ENSMUST00000184011 137 ntBASIC17.43■□□□□ 0.38
Hoxd8P23463 Gm6443-201ENSMUST00000203599 874 ntBASIC17.43■□□□□ 0.38
Hoxd8P23463 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.43■□□□□ 0.38
Hoxd8P23463 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxd8P23463 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxd8P23463 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxd8P23463 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hoxd8P23463 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Hoxd8P23463 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxd8P23463 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Hoxd8P23463 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Hoxd8P23463 Gm13884-201ENSMUST00000118103 829 ntBASIC17.42■□□□□ 0.38
Hoxd8P23463 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxd8P23463 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.42■□□□□ 0.38
Hoxd8P23463 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hoxd8P23463 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hoxd8P23463 Gm7063-201ENSMUST00000186840 981 ntBASIC17.42■□□□□ 0.38
Hoxd8P23463 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxd8P23463 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxd8P23463 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxd8P23463 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxd8P23463 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxd8P23463 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxd8P23463 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxd8P23463 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxd8P23463 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxd8P23463 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.41■□□□□ 0.38
Hoxd8P23463 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Gm5864-201ENSMUST00000202263 970 ntBASIC17.41■□□□□ 0.38
Hoxd8P23463 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxd8P23463 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxd8P23463 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hoxd8P23463 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxd8P23463 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.4■□□□□ 0.38
Hoxd8P23463 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Hoxd8P23463 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxd8P23463 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.4■□□□□ 0.38
Hoxd8P23463 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxd8P23463 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.4■□□□□ 0.38
Hoxd8P23463 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxd8P23463 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxd8P23463 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hoxd8P23463 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hoxd8P23463 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Hoxd8P23463 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hoxd8P23463 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.39■□□□□ 0.37
Hoxd8P23463 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.39■□□□□ 0.37
Hoxd8P23463 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.39■□□□□ 0.37
Hoxd8P23463 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxd8P23463 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxd8P23463 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Hoxd8P23463 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxd8P23463 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxd8P23463 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxd8P23463 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxd8P23463 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxd8P23463 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxd8P23463 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms