Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd48P18181 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cd48P18181 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.18■□□□□ 0.02
Cd48P18181 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd48P18181 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd48P18181 Gm4974-201ENSMUST00000209974 875 ntBASIC15.18■□□□□ 0.02
Cd48P18181 Gm20049-201ENSMUST00000219950 730 ntBASIC15.18■□□□□ 0.02
Cd48P18181 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd48P18181 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd48P18181 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd48P18181 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd48P18181 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.18■□□□□ 0.02
Cd48P18181 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd48P18181 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd48P18181 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd48P18181 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Cd48P18181 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Cd48P18181 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd48P18181 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.18■□□□□ 0.02
Cd48P18181 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd48P18181 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cd48P18181 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cd48P18181 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.17■□□□□ 0.02
Cd48P18181 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cd48P18181 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.17■□□□□ 0.02
Cd48P18181 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cd48P18181 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cd48P18181 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd48P18181 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.16■□□□□ 0.02
Cd48P18181 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cd48P18181 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cd48P18181 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cd48P18181 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.16■□□□□ 0.02
Cd48P18181 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.16■□□□□ 0.02
Cd48P18181 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.16■□□□□ 0.02
Cd48P18181 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cd48P18181 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.16■□□□□ 0.02
Cd48P18181 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cd48P18181 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cd48P18181 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.15■□□□□ 0.02
Cd48P18181 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Cd48P18181 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cd48P18181 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cd48P18181 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.15■□□□□ 0.02
Cd48P18181 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.15■□□□□ 0.02
Cd48P18181 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.15■□□□□ 0.02
Cd48P18181 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.15■□□□□ 0.02
Cd48P18181 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cd48P18181 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cd48P18181 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd48P18181 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd48P18181 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd48P18181 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd48P18181 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd48P18181 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms