Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp53P15975 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.58■□□□□ 0.72
Usp53P15975 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp53P15975 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.58■□□□□ 0.72
Usp53P15975 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp53P15975 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.57■□□□□ 0.72
Usp53P15975 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Usp53P15975 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.57■□□□□ 0.72
Usp53P15975 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp53P15975 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.56■□□□□ 0.72
Usp53P15975 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp53P15975 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.56■□□□□ 0.72
Usp53P15975 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Usp53P15975 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp53P15975 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp53P15975 Gm11336-201ENSMUST00000118168 334 ntBASIC19.56■□□□□ 0.72
Usp53P15975 Gm6623-201ENSMUST00000173570 544 ntBASIC19.56■□□□□ 0.72
Usp53P15975 Gm27704-201ENSMUST00000185094 107 ntBASIC19.56■□□□□ 0.72
Usp53P15975 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp53P15975 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp53P15975 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp53P15975 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp53P15975 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp53P15975 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp53P15975 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp53P15975 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
Usp53P15975 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Usp53P15975 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 Gm14859-201ENSMUST00000117752 357 ntBASIC19.55■□□□□ 0.72
Usp53P15975 Gm11950-201ENSMUST00000121615 838 ntBASIC19.55■□□□□ 0.72
Usp53P15975 Ank2-226ENSMUST00000189368 339 ntBASIC19.55■□□□□ 0.72
Usp53P15975 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.55■□□□□ 0.72
Usp53P15975 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp53P15975 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp53P15975 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp53P15975 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Usp53P15975 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Usp53P15975 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp53P15975 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Usp53P15975 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp53P15975 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp53P15975 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Usp53P15975 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp53P15975 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp53P15975 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Usp53P15975 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Usp53P15975 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.53■□□□□ 0.72
Usp53P15975 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Usp53P15975 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Usp53P15975 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp53P15975 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp53P15975 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp53P15975 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Usp53P15975 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.52■□□□□ 0.72
Usp53P15975 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Usp53P15975 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp53P15975 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp53P15975 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp53P15975 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.52■□□□□ 0.72
Usp53P15975 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp53P15975 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp53P15975 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp53P15975 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms