Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.78■□□□□ 0.44
Cd44P15379 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.78■□□□□ 0.44
Cd44P15379 Gm37856-201ENSMUST00000191634 999 ntBASIC17.78■□□□□ 0.44
Cd44P15379 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.78■□□□□ 0.44
Cd44P15379 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cd44P15379 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Cd44P15379 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cd44P15379 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd44P15379 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cd44P15379 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd44P15379 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd44P15379 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.78■□□□□ 0.44
Cd44P15379 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cd44P15379 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cd44P15379 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cd44P15379 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd44P15379 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd44P15379 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd44P15379 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd44P15379 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.77■□□□□ 0.44
Cd44P15379 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd44P15379 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd44P15379 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd44P15379 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd44P15379 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.77■□□□□ 0.44
Cd44P15379 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cd44P15379 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.77■□□□□ 0.44
Cd44P15379 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd44P15379 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.77■□□□□ 0.44
Cd44P15379 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Cd44P15379 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd44P15379 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Cd44P15379 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.77■□□□□ 0.43
Cd44P15379 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd44P15379 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd44P15379 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.77■□□□□ 0.43
Cd44P15379 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd44P15379 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Cd44P15379 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.76■□□□□ 0.43
Cd44P15379 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cd44P15379 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Cd44P15379 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Cd44P15379 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Cd44P15379 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd44P15379 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cd44P15379 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Gm12441-201ENSMUST00000121806 588 ntBASIC17.75■□□□□ 0.43
Cd44P15379 Gm17661-201ENSMUST00000170317 270 ntBASIC17.75■□□□□ 0.43
Cd44P15379 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cd44P15379 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cd44P15379 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd44P15379 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Cd44P15379 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd44P15379 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd44P15379 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd44P15379 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Cd44P15379 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd44P15379 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cd44P15379 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd44P15379 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd44P15379 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.74■□□□□ 0.43
Cd44P15379 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd44P15379 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd44P15379 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.74■□□□□ 0.43
Cd44P15379 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd44P15379 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd44P15379 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Cd44P15379 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd44P15379 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.74■□□□□ 0.43
Cd44P15379 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cd44P15379 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Cd44P15379 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms