Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rb1P13405 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rb1P13405 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rb1P13405 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rb1P13405 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rb1P13405 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rb1P13405 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rb1P13405 Gm9103-201ENSMUST00000119371 405 ntBASIC17.27■□□□□ 0.36
Rb1P13405 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rb1P13405 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.27■□□□□ 0.36
Rb1P13405 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rb1P13405 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.27■□□□□ 0.36
Rb1P13405 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rb1P13405 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rb1P13405 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Rb1P13405 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rb1P13405 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rb1P13405 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rb1P13405 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rb1P13405 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rb1P13405 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rb1P13405 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rb1P13405 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.27■□□□□ 0.35
Rb1P13405 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.26■□□□□ 0.35
Rb1P13405 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.26■□□□□ 0.35
Rb1P13405 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.26■□□□□ 0.35
Rb1P13405 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rb1P13405 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rb1P13405 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rb1P13405 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.26■□□□□ 0.35
Rb1P13405 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.26■□□□□ 0.35
Rb1P13405 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.25■□□□□ 0.35
Rb1P13405 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rb1P13405 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rb1P13405 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rb1P13405 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.25■□□□□ 0.35
Rb1P13405 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rb1P13405 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rb1P13405 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rb1P13405 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.25■□□□□ 0.35
Rb1P13405 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rb1P13405 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.25■□□□□ 0.35
Rb1P13405 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.25■□□□□ 0.35
Rb1P13405 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.25■□□□□ 0.35
Rb1P13405 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rb1P13405 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rb1P13405 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rb1P13405 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rb1P13405 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rb1P13405 Gm10418-201ENSMUST00000100943 576 ntBASIC17.24■□□□□ 0.35
Rb1P13405 Ank2-226ENSMUST00000189368 339 ntBASIC17.24■□□□□ 0.35
Rb1P13405 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.24■□□□□ 0.35
Rb1P13405 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rb1P13405 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.24■□□□□ 0.35
Rb1P13405 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rb1P13405 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rb1P13405 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rb1P13405 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rb1P13405 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rb1P13405 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rb1P13405 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rb1P13405 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rb1P13405 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rb1P13405 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rb1P13405 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.23■□□□□ 0.35
Rb1P13405 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.23■□□□□ 0.35
Rb1P13405 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rb1P13405 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.23■□□□□ 0.35
Rb1P13405 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rb1P13405 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rb1P13405 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rb1P13405 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rb1P13405 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rb1P13405 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rb1P13405 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rb1P13405 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rb1P13405 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rb1P13405 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rb1P13405 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms