Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ctla2aP12399 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ctla2aP12399 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.3■□□□□ 0.04
Ctla2aP12399 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.3■□□□□ 0.04
Ctla2aP12399 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ctla2aP12399 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ctla2aP12399 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ctla2aP12399 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ctla2aP12399 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ctla2aP12399 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ctla2aP12399 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ctla2aP12399 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ctla2aP12399 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ctla2aP12399 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Ctla2aP12399 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.29■□□□□ 0.04
Ctla2aP12399 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ctla2aP12399 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.29■□□□□ 0.04
Ctla2aP12399 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.29■□□□□ 0.04
Ctla2aP12399 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ctla2aP12399 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ctla2aP12399 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ctla2aP12399 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.28■□□□□ 0.04
Ctla2aP12399 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ctla2aP12399 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.28■□□□□ 0.04
Ctla2aP12399 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Ctla2aP12399 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ctla2aP12399 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.28■□□□□ 0.04
Ctla2aP12399 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ctla2aP12399 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ctla2aP12399 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ctla2aP12399 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.27■□□□□ 0.04
Ctla2aP12399 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Gm43017-201ENSMUST00000198296 752 ntBASIC15.27■□□□□ 0.04
Ctla2aP12399 Gm45417-201ENSMUST00000209533 758 ntBASIC15.27■□□□□ 0.04
Ctla2aP12399 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ctla2aP12399 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ctla2aP12399 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ctla2aP12399 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ctla2aP12399 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ctla2aP12399 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ctla2aP12399 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ctla2aP12399 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ctla2aP12399 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ctla2aP12399 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctla2aP12399 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ctla2aP12399 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctla2aP12399 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctla2aP12399 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctla2aP12399 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctla2aP12399 Gm10418-201ENSMUST00000100943 576 ntBASIC15.26■□□□□ 0.03
Ctla2aP12399 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.26■□□□□ 0.03
Ctla2aP12399 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.26■□□□□ 0.03
Ctla2aP12399 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.26■□□□□ 0.03
Ctla2aP12399 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ctla2aP12399 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms