Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl1P10146 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl1P10146 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccl1P10146 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ccl1P10146 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccl1P10146 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccl1P10146 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccl1P10146 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccl1P10146 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Ccl1P10146 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.2□□□□□ -0.3
Ccl1P10146 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccl1P10146 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccl1P10146 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Ccl1P10146 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.2□□□□□ -0.3
Ccl1P10146 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl1P10146 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.2□□□□□ -0.3
Ccl1P10146 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Gm43060-201ENSMUST00000200621 289 ntBASIC13.19□□□□□ -0.3
Ccl1P10146 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Reep4-203ENSMUST00000226563 1444 ntBASIC13.19□□□□□ -0.3
Ccl1P10146 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccl1P10146 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl1P10146 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Ccl1P10146 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Ccl1P10146 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccl1P10146 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccl1P10146 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccl1P10146 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccl1P10146 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccl1P10146 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccl1P10146 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ccl1P10146 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccl1P10146 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccl1P10146 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl1P10146 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccl1P10146 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccl1P10146 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccl1P10146 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccl1P10146 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccl1P10146 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccl1P10146 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccl1P10146 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl1P10146 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl1P10146 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl1P10146 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl1P10146 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.16□□□□□ -0.3
Ccl1P10146 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccl1P10146 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccl1P10146 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccl1P10146 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms