Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.03■□□□□ 0.48
Hoxc8P09025 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc8P09025 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Hoxc8P09025 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc8P09025 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc8P09025 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc8P09025 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc8P09025 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc8P09025 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc8P09025 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Hoxc8P09025 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc8P09025 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc8P09025 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Hoxc8P09025 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.02■□□□□ 0.48
Hoxc8P09025 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.02■□□□□ 0.48
Hoxc8P09025 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Hoxc8P09025 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxc8P09025 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.02■□□□□ 0.47
Hoxc8P09025 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Hoxc8P09025 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxc8P09025 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxc8P09025 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxc8P09025 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc8P09025 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc8P09025 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.01■□□□□ 0.47
Hoxc8P09025 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.01■□□□□ 0.47
Hoxc8P09025 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc8P09025 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc8P09025 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc8P09025 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc8P09025 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc8P09025 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc8P09025 Gm18195-201ENSMUST00000207604 706 ntBASIC18.01■□□□□ 0.47
Hoxc8P09025 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.01■□□□□ 0.47
Hoxc8P09025 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Hoxc8P09025 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc8P09025 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc8P09025 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc8P09025 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.01■□□□□ 0.47
Hoxc8P09025 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18■□□□□ 0.47
Hoxc8P09025 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18■□□□□ 0.47
Hoxc8P09025 Gm18733-201ENSMUST00000173950 856 ntBASIC18■□□□□ 0.47
Hoxc8P09025 Gm27867-201ENSMUST00000184778 125 ntBASIC18■□□□□ 0.47
Hoxc8P09025 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18■□□□□ 0.47
Hoxc8P09025 Gm13830-205ENSMUST00000201195 1155 ntBASIC18■□□□□ 0.47
Hoxc8P09025 AC160338.1-201ENSMUST00000214232 705 ntBASIC18■□□□□ 0.47
Hoxc8P09025 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Hoxc8P09025 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18■□□□□ 0.47
Hoxc8P09025 Gm6296-201ENSMUST00000222599 943 ntBASIC18■□□□□ 0.47
Hoxc8P09025 AC107711.5-202ENSMUST00000226429 702 ntBASIC18■□□□□ 0.47
Hoxc8P09025 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18■□□□□ 0.47
Hoxc8P09025 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18■□□□□ 0.47
Hoxc8P09025 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc8P09025 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc8P09025 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hoxc8P09025 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc8P09025 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Hoxc8P09025 Gm44357-201ENSMUST00000195897 142 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Gm19658-201ENSMUST00000196231 138 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Gm44367-201ENSMUST00000196836 138 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Gm44350-201ENSMUST00000197197 138 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Gm44390-201ENSMUST00000197533 144 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Gm44313-201ENSMUST00000198018 138 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Gm44486-201ENSMUST00000198508 138 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Gm44314-201ENSMUST00000199263 138 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Gm44394-201ENSMUST00000199558 138 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Gm44484-201ENSMUST00000199873 138 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Gm44466-201ENSMUST00000200264 138 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Gm44359-201ENSMUST00000200671 138 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.99■□□□□ 0.47
Hoxc8P09025 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.99■□□□□ 0.47
Hoxc8P09025 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc8P09025 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.99■□□□□ 0.47
Hoxc8P09025 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc8P09025 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc8P09025 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc8P09025 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc8P09025 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc8P09025 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc8P09025 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc8P09025 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc8P09025 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc8P09025 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc8P09025 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.98■□□□□ 0.47
Hoxc8P09025 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc8P09025 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms