Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.09■□□□□ 0.33
PdgfrbP05622 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfrbP05622 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PdgfrbP05622 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PdgfrbP05622 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PdgfrbP05622 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PdgfrbP05622 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrbP05622 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.08■□□□□ 0.32
PdgfrbP05622 Gm18958-201ENSMUST00000174258 762 ntBASIC17.08■□□□□ 0.32
PdgfrbP05622 Gm27463-201ENSMUST00000183569 57 ntBASIC17.08■□□□□ 0.32
PdgfrbP05622 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrbP05622 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PdgfrbP05622 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrbP05622 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrbP05622 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrbP05622 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrbP05622 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrbP05622 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrbP05622 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PdgfrbP05622 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PdgfrbP05622 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
PdgfrbP05622 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PdgfrbP05622 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PdgfrbP05622 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PdgfrbP05622 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.07■□□□□ 0.32
PdgfrbP05622 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PdgfrbP05622 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.07■□□□□ 0.32
PdgfrbP05622 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdgfrbP05622 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.07■□□□□ 0.32
PdgfrbP05622 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PdgfrbP05622 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PdgfrbP05622 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PdgfrbP05622 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PdgfrbP05622 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.06■□□□□ 0.32
PdgfrbP05622 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.06■□□□□ 0.32
PdgfrbP05622 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PdgfrbP05622 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdgfrbP05622 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.06■□□□□ 0.32
PdgfrbP05622 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PdgfrbP05622 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.05■□□□□ 0.32
PdgfrbP05622 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.05■□□□□ 0.32
PdgfrbP05622 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PdgfrbP05622 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PdgfrbP05622 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PdgfrbP05622 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PdgfrbP05622 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PdgfrbP05622 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.04■□□□□ 0.32
PdgfrbP05622 Gm11539-201ENSMUST00000119837 557 ntBASIC17.04■□□□□ 0.32
PdgfrbP05622 Gm13436-201ENSMUST00000120418 567 ntBASIC17.04■□□□□ 0.32
PdgfrbP05622 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms