Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04214 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04214 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.7■□□□□ 0.42
P04214 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04214 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
P04214 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.7■□□□□ 0.42
P04214 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04214 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
P04214 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04214 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04214 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.7■□□□□ 0.42
P04214 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04214 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P04214 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P04214 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04214 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.69■□□□□ 0.42
P04214 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P04214 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.69■□□□□ 0.42
P04214 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.69■□□□□ 0.42
P04214 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04214 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
P04214 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04214 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04214 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04214 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.69■□□□□ 0.42
P04214 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04214 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
P04214 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
P04214 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04214 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
P04214 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04214 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
P04214 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04214 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04214 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
P04214 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04214 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
P04214 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.67■□□□□ 0.42
P04214 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
P04214 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.67■□□□□ 0.42
P04214 Psmb5-202ENSMUST00000227257 622 ntBASIC17.67■□□□□ 0.42
P04214 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04214 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
P04214 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04214 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04214 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04214 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04214 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04214 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04214 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.67■□□□□ 0.42
P04214 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04214 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
P04214 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
P04214 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
P04214 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
P04214 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
P04214 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Gm25745-201ENSMUST00000174945 133 ntBASIC17.66■□□□□ 0.42
P04214 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
P04214 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.66■□□□□ 0.42
P04214 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
P04214 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04214 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.65■□□□□ 0.42
P04214 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.65■□□□□ 0.42
P04214 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
P04214 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Gm15467-201ENSMUST00000120582 445 ntBASIC17.65■□□□□ 0.42
P04214 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.65■□□□□ 0.42
P04214 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04214 Gm27702-201ENSMUST00000184512 56 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms