Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P03980 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.09□□□□□ -0.31
P03980 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
P03980 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.09□□□□□ -0.31
P03980 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P03980 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P03980 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P03980 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
P03980 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
P03980 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.08□□□□□ -0.32
P03980 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.08□□□□□ -0.32
P03980 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
P03980 Gm13148-201ENSMUST00000118892 745 ntBASIC13.08□□□□□ -0.32
P03980 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
P03980 Rab3c-203ENSMUST00000224180 967 ntBASIC13.08□□□□□ -0.32
P03980 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.08□□□□□ -0.32
P03980 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P03980 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
P03980 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P03980 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P03980 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P03980 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P03980 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P03980 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P03980 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P03980 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.07□□□□□ -0.32
P03980 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P03980 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
P03980 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P03980 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
P03980 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
P03980 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
P03980 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P03980 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.07□□□□□ -0.32
P03980 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P03980 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P03980 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P03980 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
P03980 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms