Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Gm22697-201ENSMUST00000175194 63 ntBASIC14.18□□□□□ -0.14
Hoxa3P02831 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.18□□□□□ -0.14
Hoxa3P02831 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hoxa3P02831 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hoxa3P02831 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hoxa3P02831 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Hoxa3P02831 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.17□□□□□ -0.14
Hoxa3P02831 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Hoxa3P02831 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxa3P02831 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.17□□□□□ -0.14
Hoxa3P02831 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.17□□□□□ -0.14
Hoxa3P02831 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hoxa3P02831 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.17□□□□□ -0.14
Hoxa3P02831 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hoxa3P02831 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.17□□□□□ -0.14
Hoxa3P02831 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxa3P02831 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa3P02831 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa3P02831 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa3P02831 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa3P02831 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa3P02831 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxa3P02831 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa3P02831 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa3P02831 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hoxa3P02831 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hoxa3P02831 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.16□□□□□ -0.14
Hoxa3P02831 Gm6345-202ENSMUST00000180900 204 ntBASIC14.16□□□□□ -0.14
Hoxa3P02831 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.16□□□□□ -0.14
Hoxa3P02831 Gm18101-201ENSMUST00000215769 548 ntBASIC14.16□□□□□ -0.14
Hoxa3P02831 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa3P02831 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa3P02831 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa3P02831 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa3P02831 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa3P02831 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa3P02831 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Hoxa3P02831 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Hoxa3P02831 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hoxa3P02831 Gm17661-201ENSMUST00000170317 270 ntBASIC14.15□□□□□ -0.14
Hoxa3P02831 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.15□□□□□ -0.14
Hoxa3P02831 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hoxa3P02831 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.15□□□□□ -0.14
Hoxa3P02831 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hoxa3P02831 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxa3P02831 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa3P02831 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.15□□□□□ -0.15
Hoxa3P02831 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.15
Hoxa3P02831 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Hoxa3P02831 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Hoxa3P02831 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms