Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.46■□□□□ 0.07
P01852 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.46■□□□□ 0.07
P01852 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.46■□□□□ 0.07
P01852 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
P01852 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
P01852 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
P01852 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
P01852 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
P01852 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
P01852 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
P01852 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
P01852 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
P01852 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
P01852 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
P01852 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Gm16061-201ENSMUST00000122167 857 ntBASIC15.45■□□□□ 0.06
P01852 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
P01852 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.45■□□□□ 0.06
P01852 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Haglr-201ENSMUST00000100000 2085 ntBASIC15.45■□□□□ 0.06
P01852 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
P01852 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
P01852 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
P01852 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P01852 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
P01852 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P01852 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.44■□□□□ 0.06
P01852 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
P01852 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
P01852 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P01852 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P01852 Gm13474-201ENSMUST00000122466 815 ntBASIC15.44■□□□□ 0.06
P01852 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.44■□□□□ 0.06
P01852 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.44■□□□□ 0.06
P01852 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.44■□□□□ 0.06
P01852 Gm45058-201ENSMUST00000205810 766 ntBASIC15.44■□□□□ 0.06
P01852 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
P01852 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.44■□□□□ 0.06
P01852 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.44■□□□□ 0.06
P01852 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P01852 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P01852 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P01852 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.44■□□□□ 0.06
P01852 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.44■□□□□ 0.06
P01852 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P01852 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
P01852 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
P01852 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.43■□□□□ 0.06
P01852 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.43■□□□□ 0.06
P01852 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
P01852 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.43■□□□□ 0.06
P01852 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
P01852 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
P01852 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P01852 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P01852 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.42■□□□□ 0.06
P01852 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
P01852 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
P01852 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
P01852 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.42■□□□□ 0.06
P01852 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
P01852 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
P01852 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
P01852 Mir5130-201ENSMUST00000175160 84 ntBASIC15.42■□□□□ 0.06
P01852 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P01852 Gm10231-201ENSMUST00000181584 441 ntBASIC15.42■□□□□ 0.06
P01852 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P01852 Gm10175-202ENSMUST00000208752 441 ntBASIC15.42■□□□□ 0.06
P01852 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P01852 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P01852 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P01852 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P01852 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
P01852 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P01852 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms