Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TcraP01849 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.42□□□□□ -0.42
TcraP01849 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.42□□□□□ -0.42
TcraP01849 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
TcraP01849 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
TcraP01849 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TcraP01849 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TcraP01849 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TcraP01849 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TcraP01849 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.41□□□□□ -0.42
TcraP01849 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.41□□□□□ -0.42
TcraP01849 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.41□□□□□ -0.42
TcraP01849 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
TcraP01849 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TcraP01849 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TcraP01849 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TcraP01849 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.4□□□□□ -0.42
TcraP01849 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TcraP01849 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
TcraP01849 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TcraP01849 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.4□□□□□ -0.42
TcraP01849 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TcraP01849 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TcraP01849 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
TcraP01849 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TcraP01849 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TcraP01849 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.4□□□□□ -0.42
TcraP01849 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TcraP01849 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TcraP01849 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TcraP01849 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
TcraP01849 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
TcraP01849 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Reep4-203ENSMUST00000226563 1444 ntBASIC12.39□□□□□ -0.43
TcraP01849 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
TcraP01849 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TcraP01849 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
TcraP01849 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.39□□□□□ -0.43
TcraP01849 Gm42778-201ENSMUST00000199644 553 ntBASIC12.39□□□□□ -0.43
TcraP01849 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.39□□□□□ -0.43
TcraP01849 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.39□□□□□ -0.43
TcraP01849 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TcraP01849 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TcraP01849 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
TcraP01849 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TcraP01849 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TcraP01849 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TcraP01849 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.38□□□□□ -0.43
TcraP01849 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.38□□□□□ -0.43
TcraP01849 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TcraP01849 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.38□□□□□ -0.43
TcraP01849 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TcraP01849 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TcraP01849 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
TcraP01849 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TcraP01849 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TcraP01849 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TcraP01849 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TcraP01849 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TcraP01849 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TcraP01849 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.38□□□□□ -0.43
TcraP01849 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.38□□□□□ -0.43
TcraP01849 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms