Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.38■□□□□ 0.37
Syn1O88935 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.38■□□□□ 0.37
Syn1O88935 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Syn1O88935 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Syn1O88935 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.38■□□□□ 0.37
Syn1O88935 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Syn1O88935 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Syn1O88935 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Syn1O88935 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Syn1O88935 Gm14057-201ENSMUST00000120631 482 ntBASIC17.37■□□□□ 0.37
Syn1O88935 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Syn1O88935 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Syn1O88935 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syn1O88935 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.37■□□□□ 0.37
Syn1O88935 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.37■□□□□ 0.37
Syn1O88935 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syn1O88935 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syn1O88935 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Syn1O88935 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syn1O88935 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.37■□□□□ 0.37
Syn1O88935 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syn1O88935 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Syn1O88935 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.36■□□□□ 0.37
Syn1O88935 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.36■□□□□ 0.37
Syn1O88935 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.36■□□□□ 0.37
Syn1O88935 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Syn1O88935 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syn1O88935 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Syn1O88935 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Syn1O88935 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Syn1O88935 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Syn1O88935 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Syn1O88935 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Syn1O88935 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Syn1O88935 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syn1O88935 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Syn1O88935 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.35■□□□□ 0.37
Syn1O88935 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Syn1O88935 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.34■□□□□ 0.37
Syn1O88935 Gm14494-201ENSMUST00000118786 435 ntBASIC17.34■□□□□ 0.37
Syn1O88935 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.34■□□□□ 0.37
Syn1O88935 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.34■□□□□ 0.37
Syn1O88935 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Rprl3-201ENSMUST00000157400 290 ntBASIC17.34■□□□□ 0.37
Syn1O88935 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.34■□□□□ 0.37
Syn1O88935 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.34■□□□□ 0.37
Syn1O88935 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.34■□□□□ 0.37
Syn1O88935 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Syn1O88935 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.34■□□□□ 0.37
Syn1O88935 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syn1O88935 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Syn1O88935 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms