Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.13■□□□□ 0.01
Hdac3O88895 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hdac3O88895 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.13■□□□□ 0.01
Hdac3O88895 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Hdac3O88895 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Hdac3O88895 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.12■□□□□ 0.01
Hdac3O88895 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 Gm13401-201ENSMUST00000117074 291 ntBASIC15.12■□□□□ 0.01
Hdac3O88895 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.12■□□□□ 0.01
Hdac3O88895 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Hdac3O88895 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.12■□□□□ 0.01
Hdac3O88895 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Hdac3O88895 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac3O88895 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.11■□□□□ 0.01
Hdac3O88895 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Hdac3O88895 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.11■□□□□ 0.01
Hdac3O88895 Gm12382-201ENSMUST00000122005 922 ntBASIC15.11■□□□□ 0.01
Hdac3O88895 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Hdac3O88895 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Hdac3O88895 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac3O88895 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Hdac3O88895 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.1■□□□□ 0.01
Hdac3O88895 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hdac3O88895 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Gm10698-201ENSMUST00000182663 604 ntBASIC15.1■□□□□ 0.01
Hdac3O88895 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.1■□□□□ 0.01
Hdac3O88895 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hdac3O88895 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hdac3O88895 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hdac3O88895 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.09■□□□□ 0.01
Hdac3O88895 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hdac3O88895 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hdac3O88895 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.09■□□□□ 0.01
Hdac3O88895 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.09■□□□□ 0.01
Hdac3O88895 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hdac3O88895 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Hdac3O88895 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.09■□□□□ 0.01
Hdac3O88895 Gm4974-201ENSMUST00000209974 875 ntBASIC15.09■□□□□ 0.01
Hdac3O88895 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hdac3O88895 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hdac3O88895 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hdac3O88895 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hdac3O88895 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms