Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Hcn3O88705 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
Hcn3O88705 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.21■□□□□ 0.19
Hcn3O88705 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Gm26524-201ENSMUST00000192339 390 ntBASIC16.21■□□□□ 0.19
Hcn3O88705 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hcn3O88705 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.21■□□□□ 0.19
Hcn3O88705 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Hcn3O88705 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn3O88705 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hcn3O88705 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.21■□□□□ 0.18
Hcn3O88705 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Hcn3O88705 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hcn3O88705 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn3O88705 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn3O88705 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn3O88705 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn3O88705 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.2■□□□□ 0.18
Hcn3O88705 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hcn3O88705 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn3O88705 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
Hcn3O88705 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn3O88705 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.2■□□□□ 0.18
Hcn3O88705 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn3O88705 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.2■□□□□ 0.18
Hcn3O88705 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn3O88705 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hcn3O88705 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.2■□□□□ 0.18
Hcn3O88705 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn3O88705 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.2■□□□□ 0.18
Hcn3O88705 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Hcn3O88705 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn3O88705 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Hcn3O88705 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn3O88705 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.19■□□□□ 0.18
Hcn3O88705 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.19■□□□□ 0.18
Hcn3O88705 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn3O88705 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn3O88705 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn3O88705 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Hcn3O88705 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.19■□□□□ 0.18
Hcn3O88705 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.19■□□□□ 0.18
Hcn3O88705 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.19■□□□□ 0.18
Hcn3O88705 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.19■□□□□ 0.18
Hcn3O88705 Rab3c-203ENSMUST00000224180 967 ntBASIC16.19■□□□□ 0.18
Hcn3O88705 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Hcn3O88705 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn3O88705 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn3O88705 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn3O88705 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.19■□□□□ 0.18
Hcn3O88705 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Hcn3O88705 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hcn3O88705 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.18■□□□□ 0.18
Hcn3O88705 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.18■□□□□ 0.18
Hcn3O88705 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hcn3O88705 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hcn3O88705 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn3O88705 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hcn3O88705 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.17■□□□□ 0.18
Hcn3O88705 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms