Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.2■□□□□ 0.18
Hcn1O88704 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.2■□□□□ 0.18
Hcn1O88704 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Hcn1O88704 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.2■□□□□ 0.18
Hcn1O88704 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Hcn1O88704 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hcn1O88704 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hcn1O88704 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn1O88704 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Hcn1O88704 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn1O88704 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hcn1O88704 Gm10517-202ENSMUST00000192970 758 ntBASIC16.19■□□□□ 0.18
Hcn1O88704 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn1O88704 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn1O88704 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.19■□□□□ 0.18
Hcn1O88704 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcn1O88704 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.18■□□□□ 0.18
Hcn1O88704 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.18■□□□□ 0.18
Hcn1O88704 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.18■□□□□ 0.18
Hcn1O88704 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Hcn1O88704 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.18■□□□□ 0.18
Hcn1O88704 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.18■□□□□ 0.18
Hcn1O88704 Idnk-204ENSMUST00000226010 1898 ntBASIC16.18■□□□□ 0.18
Hcn1O88704 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcn1O88704 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hcn1O88704 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Hcn1O88704 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.17■□□□□ 0.18
Hcn1O88704 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.17■□□□□ 0.18
Hcn1O88704 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.17■□□□□ 0.18
Hcn1O88704 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.17■□□□□ 0.18
Hcn1O88704 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn1O88704 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.16■□□□□ 0.18
Hcn1O88704 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.16■□□□□ 0.18
Hcn1O88704 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.16■□□□□ 0.18
Hcn1O88704 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Gm21814-202ENSMUST00000203277 873 ntBASIC16.16■□□□□ 0.18
Hcn1O88704 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.16■□□□□ 0.18
Hcn1O88704 Timm23-208ENSMUST00000226683 750 ntBASIC16.16■□□□□ 0.18
Hcn1O88704 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.16■□□□□ 0.18
Hcn1O88704 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hcn1O88704 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms