Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.63■□□□□ 0.89
Cops6O88545 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops6O88545 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops6O88545 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cops6O88545 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops6O88545 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.63■□□□□ 0.89
Cops6O88545 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.63■□□□□ 0.89
Cops6O88545 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.63■□□□□ 0.89
Cops6O88545 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops6O88545 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops6O88545 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.63■□□□□ 0.89
Cops6O88545 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cops6O88545 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cops6O88545 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cops6O88545 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cops6O88545 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cops6O88545 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cops6O88545 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Cops6O88545 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.62■□□□□ 0.89
Cops6O88545 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cops6O88545 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Cops6O88545 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cops6O88545 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.62■□□□□ 0.89
Cops6O88545 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.62■□□□□ 0.89
Cops6O88545 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cops6O88545 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cops6O88545 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cops6O88545 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.62■□□□□ 0.89
Cops6O88545 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Cops6O88545 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cops6O88545 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cops6O88545 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cops6O88545 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.61■□□□□ 0.89
Cops6O88545 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cops6O88545 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.61■□□□□ 0.89
Cops6O88545 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.61■□□□□ 0.89
Cops6O88545 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.61■□□□□ 0.89
Cops6O88545 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cops6O88545 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cops6O88545 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.61■□□□□ 0.89
Cops6O88545 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cops6O88545 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cops6O88545 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cops6O88545 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cops6O88545 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cops6O88545 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cops6O88545 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cops6O88545 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cops6O88545 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cops6O88545 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.6■□□□□ 0.89
Cops6O88545 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.6■□□□□ 0.89
Cops6O88545 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cops6O88545 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cops6O88545 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cops6O88545 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cops6O88545 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cops6O88545 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cops6O88545 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cops6O88545 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cops6O88545 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cops6O88545 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cops6O88545 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cops6O88545 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cops6O88545 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cops6O88545 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.59■□□□□ 0.89
Cops6O88545 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cops6O88545 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.59■□□□□ 0.89
Cops6O88545 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cops6O88545 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.59■□□□□ 0.89
Cops6O88545 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cops6O88545 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cops6O88545 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.59■□□□□ 0.89
Cops6O88545 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cops6O88545 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cops6O88545 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cops6O88545 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cops6O88545 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cops6O88545 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cops6O88545 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cops6O88545 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cops6O88545 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cops6O88545 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.58■□□□□ 0.89
Cops6O88545 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cops6O88545 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cops6O88545 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.58■□□□□ 0.89
Cops6O88545 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cops6O88545 Gm27459-201ENSMUST00000184860 107 ntBASIC20.58■□□□□ 0.89
Cops6O88545 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cops6O88545 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cops6O88545 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cops6O88545 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cops6O88545 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cops6O88545 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cops6O88545 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.57■□□□□ 0.88
Cops6O88545 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Cops6O88545 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cops6O88545 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cops6O88545 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.57■□□□□ 0.88
Cops6O88545 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cops6O88545 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms