Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfdp1O88271 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfdp1O88271 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfdp1O88271 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cfdp1O88271 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.09■□□□□ 0.97
Cfdp1O88271 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Cfdp1O88271 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Gm5587-201ENSMUST00000206270 674 ntBASIC21.09■□□□□ 0.97
Cfdp1O88271 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.09■□□□□ 0.97
Cfdp1O88271 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.09■□□□□ 0.97
Cfdp1O88271 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfdp1O88271 Wnt10b-204ENSMUST00000226655 1807 ntBASIC21.08■□□□□ 0.97
Cfdp1O88271 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfdp1O88271 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cfdp1O88271 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfdp1O88271 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfdp1O88271 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cfdp1O88271 Gm9013-201ENSMUST00000132939 882 ntBASIC21.08■□□□□ 0.97
Cfdp1O88271 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfdp1O88271 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfdp1O88271 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfdp1O88271 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cfdp1O88271 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cfdp1O88271 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cfdp1O88271 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfdp1O88271 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfdp1O88271 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfdp1O88271 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfdp1O88271 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Cfdp1O88271 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cfdp1O88271 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfdp1O88271 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC21.07■□□□□ 0.96
Cfdp1O88271 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfdp1O88271 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfdp1O88271 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfdp1O88271 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfdp1O88271 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfdp1O88271 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfdp1O88271 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cfdp1O88271 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfdp1O88271 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfdp1O88271 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfdp1O88271 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cfdp1O88271 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfdp1O88271 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfdp1O88271 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC21.06■□□□□ 0.96
Cfdp1O88271 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfdp1O88271 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cfdp1O88271 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cfdp1O88271 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfdp1O88271 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.06■□□□□ 0.96
Cfdp1O88271 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfdp1O88271 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfdp1O88271 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cfdp1O88271 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfdp1O88271 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC21.05■□□□□ 0.96
Cfdp1O88271 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Cfdp1O88271 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Cfdp1O88271 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.05■□□□□ 0.96
Cfdp1O88271 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.05■□□□□ 0.96
Cfdp1O88271 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.05■□□□□ 0.96
Cfdp1O88271 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfdp1O88271 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfdp1O88271 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfdp1O88271 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfdp1O88271 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cfdp1O88271 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cfdp1O88271 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfdp1O88271 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cfdp1O88271 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.04■□□□□ 0.96
Cfdp1O88271 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cfdp1O88271 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cfdp1O88271 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfdp1O88271 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cfdp1O88271 Gm37722-201ENSMUST00000193757 208 ntBASIC21.04■□□□□ 0.96
Cfdp1O88271 Gm21362-201ENSMUST00000194272 928 ntBASIC21.04■□□□□ 0.96
Cfdp1O88271 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cfdp1O88271 Phf7-203ENSMUST00000226565 1971 ntBASIC21.04■□□□□ 0.96
Cfdp1O88271 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cfdp1O88271 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfdp1O88271 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cfdp1O88271 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cfdp1O88271 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfdp1O88271 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfdp1O88271 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cfdp1O88271 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms