Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Gm10139O88245 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC10.32□□□□□ -0.76
Gm10139O88245 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm10139O88245 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm10139O88245 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm10139O88245 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm10139O88245 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm10139O88245 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Gm10139O88245 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm10139O88245 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Gm10139O88245 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Gm10139O88245 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC10.31□□□□□ -0.76
Gm10139O88245 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Gm10139O88245 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Gm10139O88245 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Gm10139O88245 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Gm10139O88245 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
Gm10139O88245 Gm9731-201ENSMUST00000209480 747 ntBASIC10.31□□□□□ -0.76
Gm10139O88245 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Gm10139O88245 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10139O88245 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC10.31□□□□□ -0.76
Gm10139O88245 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10139O88245 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Gm10139O88245 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Gm10139O88245 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10139O88245 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC10.3□□□□□ -0.76
Gm10139O88245 Gm27000-201ENSMUST00000182943 842 ntBASIC10.3□□□□□ -0.76
Gm10139O88245 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Gm10139O88245 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC10.3□□□□□ -0.76
Gm10139O88245 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Gm10139O88245 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Gm10139O88245 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10139O88245 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Gm10139O88245 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Gm10139O88245 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Gm10139O88245 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Gm10139O88245 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Gm10139O88245 Gm12527-201ENSMUST00000117967 564 ntBASIC10.29□□□□□ -0.76
Gm10139O88245 Gm15378-201ENSMUST00000121894 207 ntBASIC10.29□□□□□ -0.76
Gm10139O88245 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Gm10139O88245 Gm44878-201ENSMUST00000205812 1295 ntBASIC10.29□□□□□ -0.76
Gm10139O88245 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC10.29□□□□□ -0.76
Gm10139O88245 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Gm10139O88245 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC10.29□□□□□ -0.76
Gm10139O88245 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10139O88245 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms