Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Pdlim3O70209 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.36■□□□□ 0.05
Pdlim3O70209 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.36■□□□□ 0.05
Pdlim3O70209 Gm4968-201ENSMUST00000071458 858 ntBASIC15.36■□□□□ 0.05
Pdlim3O70209 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pdlim3O70209 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pdlim3O70209 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pdlim3O70209 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 Gm5408-201ENSMUST00000197998 747 ntBASIC15.35■□□□□ 0.05
Pdlim3O70209 Gm2559-201ENSMUST00000201323 363 ntBASIC15.35■□□□□ 0.05
Pdlim3O70209 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.35■□□□□ 0.05
Pdlim3O70209 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Pdlim3O70209 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.35■□□□□ 0.05
Pdlim3O70209 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.35■□□□□ 0.05
Pdlim3O70209 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Pdlim3O70209 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim3O70209 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Pdlim3O70209 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pdlim3O70209 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pdlim3O70209 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.34■□□□□ 0.05
Pdlim3O70209 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pdlim3O70209 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdlim3O70209 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim3O70209 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdlim3O70209 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim3O70209 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim3O70209 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Pdlim3O70209 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim3O70209 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim3O70209 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim3O70209 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim3O70209 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pdlim3O70209 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.33■□□□□ 0.04
Pdlim3O70209 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Pdlim3O70209 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim3O70209 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pdlim3O70209 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim3O70209 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim3O70209 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pdlim3O70209 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim3O70209 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim3O70209 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.32■□□□□ 0.04
Pdlim3O70209 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.32■□□□□ 0.04
Pdlim3O70209 Gm18284-201ENSMUST00000172604 624 ntBASIC15.32■□□□□ 0.04
Pdlim3O70209 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.32■□□□□ 0.04
Pdlim3O70209 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pdlim3O70209 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.32■□□□□ 0.04
Pdlim3O70209 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pdlim3O70209 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms