Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.42■□□□□ 0.7
Copb2O55029 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Copb2O55029 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Copb2O55029 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Copb2O55029 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Copb2O55029 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Copb2O55029 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Copb2O55029 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Copb2O55029 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Copb2O55029 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Copb2O55029 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Copb2O55029 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Copb2O55029 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Copb2O55029 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.41■□□□□ 0.7
Copb2O55029 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.41■□□□□ 0.7
Copb2O55029 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Copb2O55029 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Copb2O55029 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Copb2O55029 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.4■□□□□ 0.7
Copb2O55029 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Copb2O55029 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.4■□□□□ 0.7
Copb2O55029 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.4■□□□□ 0.7
Copb2O55029 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.4■□□□□ 0.7
Copb2O55029 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.4■□□□□ 0.7
Copb2O55029 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Copb2O55029 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Copb2O55029 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.39■□□□□ 0.7
Copb2O55029 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Copb2O55029 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Copb2O55029 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Copb2O55029 Gm13186-201ENSMUST00000118031 316 ntBASIC19.39■□□□□ 0.69
Copb2O55029 Gm11336-201ENSMUST00000118168 334 ntBASIC19.39■□□□□ 0.69
Copb2O55029 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Copb2O55029 Gm17807-201ENSMUST00000186869 298 ntBASIC19.39■□□□□ 0.69
Copb2O55029 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Copb2O55029 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.39■□□□□ 0.69
Copb2O55029 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Copb2O55029 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.39■□□□□ 0.69
Copb2O55029 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Copb2O55029 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Copb2O55029 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Copb2O55029 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Copb2O55029 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Copb2O55029 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.38■□□□□ 0.69
Copb2O55029 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Copb2O55029 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.38■□□□□ 0.69
Copb2O55029 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.38■□□□□ 0.69
Copb2O55029 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Copb2O55029 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Copb2O55029 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Copb2O55029 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.38■□□□□ 0.69
Copb2O55029 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.38■□□□□ 0.69
Copb2O55029 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Copb2O55029 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Copb2O55029 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.38■□□□□ 0.69
Copb2O55029 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Copb2O55029 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Copb2O55029 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Copb2O55029 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Copb2O55029 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Copb2O55029 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Copb2O55029 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Copb2O55029 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb2O55029 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb2O55029 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Copb2O55029 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.37■□□□□ 0.69
Copb2O55029 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb2O55029 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Copb2O55029 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb2O55029 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb2O55029 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb2O55029 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb2O55029 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Copb2O55029 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb2O55029 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Copb2O55029 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms