Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm4974-201ENSMUST00000209974 875 ntBASIC15.7■□□□□ 0.1
BckdkO55028 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BckdkO55028 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
BckdkO55028 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BckdkO55028 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BckdkO55028 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BckdkO55028 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BckdkO55028 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BckdkO55028 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BckdkO55028 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BckdkO55028 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
BckdkO55028 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.69■□□□□ 0.1
BckdkO55028 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.69■□□□□ 0.1
BckdkO55028 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
BckdkO55028 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.69■□□□□ 0.1
BckdkO55028 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
BckdkO55028 Gm12085-201ENSMUST00000119263 940 ntBASIC15.69■□□□□ 0.1
BckdkO55028 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.69■□□□□ 0.1
BckdkO55028 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
BckdkO55028 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.69■□□□□ 0.1
BckdkO55028 Haglr-201ENSMUST00000100000 2085 ntBASIC15.69■□□□□ 0.1
BckdkO55028 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
BckdkO55028 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
BckdkO55028 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BckdkO55028 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BckdkO55028 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BckdkO55028 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
BckdkO55028 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
BckdkO55028 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
BckdkO55028 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.68■□□□□ 0.1
BckdkO55028 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BckdkO55028 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.68■□□□□ 0.1
BckdkO55028 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BckdkO55028 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
BckdkO55028 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BckdkO55028 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BckdkO55028 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BckdkO55028 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
BckdkO55028 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BckdkO55028 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.67■□□□□ 0.1
BckdkO55028 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.67■□□□□ 0.1
BckdkO55028 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Gm38027-201ENSMUST00000192315 235 ntBASIC15.67■□□□□ 0.1
BckdkO55028 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
BckdkO55028 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
BckdkO55028 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
BckdkO55028 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.67■□□□□ 0.1
BckdkO55028 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BckdkO55028 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
BckdkO55028 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.66■□□□□ 0.1
BckdkO55028 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
BckdkO55028 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Gm18959-201ENSMUST00000208954 655 ntBASIC15.66■□□□□ 0.1
BckdkO55028 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.66■□□□□ 0.1
BckdkO55028 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BckdkO55028 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BckdkO55028 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms