Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per2O54943 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per2O54943 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per2O54943 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Per2O54943 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.62■□□□□ 0.41
Per2O54943 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per2O54943 Il3ra-202ENSMUST00000223589 738 ntBASIC17.62■□□□□ 0.41
Per2O54943 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.62■□□□□ 0.41
Per2O54943 Odf3b-204ENSMUST00000227834 930 ntBASIC17.62■□□□□ 0.41
Per2O54943 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per2O54943 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per2O54943 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per2O54943 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Per2O54943 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Per2O54943 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.62■□□□□ 0.41
Per2O54943 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Per2O54943 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per2O54943 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Per2O54943 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.62■□□□□ 0.41
Per2O54943 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per2O54943 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per2O54943 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per2O54943 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Per2O54943 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per2O54943 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per2O54943 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per2O54943 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per2O54943 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per2O54943 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.61■□□□□ 0.41
Per2O54943 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.61■□□□□ 0.41
Per2O54943 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Per2O54943 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per2O54943 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Per2O54943 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per2O54943 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per2O54943 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per2O54943 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per2O54943 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.6■□□□□ 0.41
Per2O54943 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.6■□□□□ 0.41
Per2O54943 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.6■□□□□ 0.41
Per2O54943 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.6■□□□□ 0.41
Per2O54943 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.6■□□□□ 0.41
Per2O54943 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per2O54943 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per2O54943 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per2O54943 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Per2O54943 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per2O54943 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Per2O54943 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per2O54943 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per2O54943 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per2O54943 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per2O54943 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Per2O54943 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per2O54943 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per2O54943 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per2O54943 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per2O54943 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per2O54943 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Per2O54943 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.59■□□□□ 0.41
Per2O54943 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per2O54943 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Per2O54943 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.59■□□□□ 0.41
Per2O54943 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Per2O54943 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Per2O54943 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Per2O54943 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Per2O54943 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.59■□□□□ 0.41
Per2O54943 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.59■□□□□ 0.41
Per2O54943 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.59■□□□□ 0.41
Per2O54943 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Per2O54943 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Per2O54943 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Per2O54943 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Per2O54943 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Per2O54943 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.58■□□□□ 0.41
Per2O54943 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Per2O54943 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.58■□□□□ 0.41
Per2O54943 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.58■□□□□ 0.41
Per2O54943 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Per2O54943 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Per2O54943 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Per2O54943 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Per2O54943 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.58■□□□□ 0.4
Per2O54943 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Per2O54943 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Per2O54943 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Per2O54943 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Per2O54943 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Per2O54943 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Per2O54943 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Per2O54943 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.58■□□□□ 0.4
Per2O54943 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Per2O54943 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Per2O54943 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Per2O54943 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Per2O54943 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Per2O54943 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Per2O54943 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.57■□□□□ 0.4
Per2O54943 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms