Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Limk2O54785 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Limk2O54785 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Limk2O54785 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Limk2O54785 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Limk2O54785 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Limk2O54785 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Limk2O54785 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Limk2O54785 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Limk2O54785 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Limk2O54785 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Limk2O54785 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Limk2O54785 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Limk2O54785 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.15■□□□□ 0.34
Limk2O54785 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Limk2O54785 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.15■□□□□ 0.34
Limk2O54785 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Limk2O54785 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Limk2O54785 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Limk2O54785 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Limk2O54785 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Limk2O54785 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.14■□□□□ 0.33
Limk2O54785 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Limk2O54785 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.14■□□□□ 0.33
Limk2O54785 Gm25016-201ENSMUST00000158399 131 ntBASIC17.14■□□□□ 0.33
Limk2O54785 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.14■□□□□ 0.33
Limk2O54785 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Limk2O54785 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Limk2O54785 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Limk2O54785 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Limk2O54785 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Limk2O54785 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Limk2O54785 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Limk2O54785 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Limk2O54785 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.14■□□□□ 0.33
Limk2O54785 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Limk2O54785 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Limk2O54785 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Limk2O54785 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Limk2O54785 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Limk2O54785 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Limk2O54785 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Limk2O54785 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Limk2O54785 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Limk2O54785 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Limk2O54785 Gm9103-201ENSMUST00000119371 405 ntBASIC17.13■□□□□ 0.33
Limk2O54785 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.13■□□□□ 0.33
Limk2O54785 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Limk2O54785 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Limk2O54785 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Limk2O54785 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Limk2O54785 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Limk2O54785 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limk2O54785 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limk2O54785 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limk2O54785 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limk2O54785 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Limk2O54785 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limk2O54785 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.12■□□□□ 0.33
Limk2O54785 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limk2O54785 Gm16061-201ENSMUST00000122167 857 ntBASIC17.12■□□□□ 0.33
Limk2O54785 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Limk2O54785 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limk2O54785 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limk2O54785 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Limk2O54785 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limk2O54785 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limk2O54785 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.11■□□□□ 0.33
Limk2O54785 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.11■□□□□ 0.33
Limk2O54785 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.11■□□□□ 0.33
Limk2O54785 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.11■□□□□ 0.33
Limk2O54785 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.11■□□□□ 0.33
Limk2O54785 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limk2O54785 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Limk2O54785 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.1■□□□□ 0.33
Limk2O54785 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms